RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MRPL57Q9BQC6 102 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SORBS1Q9BX66 1292 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SPATA16Q9BXB7 569 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 PLA2G2FQ9BZM2 168 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 WWP1Q9H0M0 922 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 MAP6D1Q9H9H5 199 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLCO1B3Q9NPD5 702 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 KRCC1Q9NPI7 259 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 MARCOQ9UEW3 520 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SUN2Q9UH99 717 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CD84Q9UIB8 345 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 EMCNQ9ULC0 261 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 MTCH2Q9Y6C9 303 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 USH1CQ9Y6N9 552 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 BRCA2P51587 3418 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ATXN2Q99700 1313 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 RGSL1A5PLK6 1076 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 AQP12BA6NM10 295 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SYCE1LA8MT33 242 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 H3BQ06 376 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 PSMD11O00231 422 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ASNA1O43681 348 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 MAGEC1O60732 1142 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 KERAO60938 352 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 CRCPO75575 148 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 LYPLA1O75608 230 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 NEURL1O76050 574 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRIM16O95361 564 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 FTH1P02794 183 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 CTSLP07711 333 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR56A5P0C7T3 313 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 CD1DP15813 335 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 IGFBP2P18065 325 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 MSH3P20585 1137 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 KCNA5P22460 613 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 LHCGRP22888 699 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 RPS3P23396 243 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 PSMA3P25788 255 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 MMP12P39900 470 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARL1P40616 181 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC26A3P40879 764 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SKIV2L2P42285 1042 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 NSG1P42857 185 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SPINT3P49223 89 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SUOXP51687 545 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMPRSS3P57727 454 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 FOXL2P58012 376 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM3BP58499 235 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ABCE1P61221 599 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ATP6V0D1P61421 351 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 XIAPP98170 497 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 DLG1Q12959 904 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 RALGDSQ12967 914 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 IFT88Q13099 833 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 HTR4Q13639 388 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 RCN2Q14257 317 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 BTBD16Q32M84 506 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 LRIT3Q3SXY7 679 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TTC31Q49AM3 519 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SYTL3Q4VX76 610 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SETMARQ53H47 684 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 CTSL3PQ5NE16 218 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF776Q68DI1 518 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 RAET1GQ6H3X3 334 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC16A12Q6ZSM3 486 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ERN2Q76MJ5 926 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRILQ7L0X0 811 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRPM8Q7Z2W7 1104 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 PIWIL4Q7Z3Z4 852 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRMT11Q7Z4G4 463 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 HSD11B1LQ7Z5J1 315 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 GATAD2AQ86YP4 633 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 KLBQ86Z14 1044 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 MMAAQ8IVH4 418 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC22A9Q8IVM8 553 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 PIANPQ8IYJ0 282 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 CPNE9Q8IYJ1 553 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 KIRREL3Q8IZU9 778 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 CENPLQ8N0S6 344 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 FBXO39Q8N4B4 442 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SPATA6LQ8N4H0 392 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRAM1L1Q8N609 369 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZBTB2Q8N680 514 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 PTGR2Q8N8N7 351 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 GBP7Q8N8V2 638 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SIDT2Q8NBJ9 832 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 GPR26Q8NDV2 337 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 AGR3Q8TD06 166 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 HCAR2Q8TDS4 363 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 GANCQ8TET4 914 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 NUDCD2Q8WVJ2 157 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 C10orf82Q8WW14 230 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 HMGB4Q8WW32 186 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 KCNJ9Q92806 393 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 DNASE1L2Q92874 299 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 RAB7BQ96AH8 199 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARRDC3Q96B67 414 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 AP2M1Q96CW1 435 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ERLEC1Q96DZ1 483 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 301.6 ms