RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PALB2Q86YC2 1186 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC13A5Q86YT5 568 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CLEC10AQ8IUN9 316 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MAP7D3Q8IWC1 876 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ADHFE1Q8IWW8 467 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CMTM4Q8IZR5 234 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF444Q8N0Y2 327 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ARHGAP18Q8N392 663 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM130Q8N3G9 435 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 TBC1D19Q8N5T2 526 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ANKRD13CQ8N6S4 541 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PNPLA1Q8N8W4 532 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 BOLLQ8N9W6 283 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MLKLQ8NB16 471 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CCDC197Q8NCU1 140 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 C19orf18Q8NEA5 215 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 BHLHE22Q8NFJ8 381 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 OR7G2Q8NG99 324 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 OR10H4Q8NGA5 316 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 OR4A15Q8NGL6 344 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MARCH1Q8TCQ1 289 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF398Q8TD17 642 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 UBTD2Q8WUN7 234 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 FAR1Q8WVX9 515 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 HTR3CQ8WXA8 447 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PIGCQ92535 297 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MAP4K1Q92918 833 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 HIST1H2ACQ93077 130 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CCDC127Q96BQ5 260 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 LENG1Q96BZ8 264 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 FBXL8Q96CD0 374 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ASB9Q96DX5 294 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 HPDLQ96IR7 371 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 EGLN2Q96KS0 407 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 C9orf72Q96LT7 481 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 C3orf30Q96M34 536 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 GPR137Q96N19 417 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF578Q96N58 590 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PNKPQ96T60 521 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ACOX2Q99424 681 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CGREF1Q99674 301 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PRMT1Q99873 361 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 RNF26Q9BY78 433 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 POTEKPQ9BYX7 375 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ILKAPQ9H0C8 392 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 UPF3AQ9H1J1 476 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PIGMQ9H3S5 423 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 TUBB1Q9H4B7 451 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 POLD4Q9HCU8 107 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 LYRM4Q9HD34 91 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MYNNQ9NPC7 610 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ADAP2Q9NPF8 381 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 UFSP2Q9NUQ7 469 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 POT1Q9NUX5 634 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PARPBPQ9NWS1 579 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 LYARQ9NX58 379 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CLEC5AQ9NY25 188 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 NLKQ9UBE8 527 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 WARS2Q9UGM6 360 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 LCMT1Q9UIC8 334 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF639Q9UID6 485 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 LNPEPQ9UIQ6 1025 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CDC42EP3Q9UKI2 254 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 IKZF2Q9UKS7 526 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 RNF150Q9ULK6 438 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ABCG2Q9UNQ0 655 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 LRP12Q9Y561 859 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 RBM8AQ9Y5S9 174 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 USP16Q9Y5T5 823 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CLIC4Q9Y696 253 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 LRPPRCP42704 1394 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MROH7-TTC4A0A0A0MT08 1334 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 PNPLA7Q6ZV29 1317 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SALL1Q9NSC2 1324 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 NCOA3Q9Y6Q9 1424 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 CDC14CA4D256 554 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 FAM181BA6NEQ2 426 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ARGFXA6NJG6 315 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 DRGXA6NNA5 263 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 LRRN3E7EW58 273 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 NPIPA7E9PJI5 369 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 F5H697 171 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 H0YJX3 145 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 RBAK-RBAKDNI3L0D1 243 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 I6L893 689 aaPredicted RBP2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SGK494L7N484 410 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 M0R296 226 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 PGRMC1O00264 195 aaKnown RBP2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 LEFTY2O00292 366 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SDHDO14521 159 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC22A2O15244 555 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 OR1F1O43749 312 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 TMPRSS11DO60235 418 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF217O75362 1048 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 RPS6KA5O75582 802 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 CYP7B1O75881 506 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 CIAO1O76071 339 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 AP2A2O94973 939 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms