RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 FARSAQ9Y285 508 aaKnown RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 SEC16AO15027 2179 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 C12orf71A8MTZ7 269 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 M0R036 132 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 WNT9AO14904 365 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 APOC1P02654 83 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 SELPP16109 830 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 SOX3P41225 446 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ALDH3B2P48448 385 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 DGKGP49619 791 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 AP1S2P56377 157 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ID2Q02363 134 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 CD300CQ08708 224 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 C2orf27AQ580R0 203 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ZCCHC12Q6PEW1 402 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 DNAJB7Q7Z6W7 309 aaPredicted RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 GAL3ST3Q96A11 431 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 METTL8Q9H825 291 aaKnown RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 MKKSQ9NPJ1 570 aaPredicted RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ENPP5Q9UJA9 477 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ZFR2Q9UPR6 939 aaKnown RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 PLEKHA6Q9Y2H5 1048 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ENTPD6O75354 484 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 POP7O75817 140 aaKnown RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 PEPDP12955 493 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 CBLP22681 906 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 DNAJB1P25685 340 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 CD40LGP29965 261 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 RGRP47804 291 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 EIF1AXP47813 144 aaKnown RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 SLC9A3P48764 834 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 SEMA3AQ14563 771 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 UPP1Q16831 310 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 PKDCCQ504Y2 493 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 GPRC6AQ5T6X5 926 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 KCTD9Q7L273 389 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 SCD5Q86SK9 330 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 IQCF1Q8N6M8 205 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 OR8S1Q8NH09 359 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 SLCO4A1Q96BD0 722 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 MAPKAP1Q9BPZ7 522 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 KCNH6Q9H252 994 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ALKBH4Q9NXW9 302 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 UTS2RQ9UKP6 389 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 RLN2P04090 185 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 SRPRAP08240 638 aaKnown RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 TACR1P25103 407 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 IDUAP35475 653 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 GRSF1Q12849 480 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 NFATC2Q13469 925 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 SPHARQ15513 63 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 SHQ1Q6PI26 577 aaKnown RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 TSPAN33Q86UF1 283 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 SH3RF2Q8TEC5 729 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 SLC22A17Q8WUG5 538 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 NDC1Q9BTX1 674 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 LYARQ9NX58 379 aaKnown RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 GSKIPQ9P0R6 139 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 GPR52Q9Y2T5 361 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ALPK2Q86TB3 2170 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 SYN3O14994 580 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 AQP9O43315 295 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 GPR32O75388 356 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 OR2B3O76000 313 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 SCGB1D2O95969 90 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 EPOP01588 193 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ALPLP05186 524 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 CNR2P34972 360 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ARF3P61204 181 aaPredicted RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF45Q02386 682 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 PRKCDQ05655 676 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF33AQ06730 810 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 USF2Q15853 346 aaPredicted RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 KDELC1Q6UW63 502 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 OR2L2Q8NH16 312 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 THEM6Q8WUY1 208 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 RDH12Q96NR8 316 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 MRM3Q9HC36 420 aaKnown RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 SCML2Q9UQR0 700 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 DLGAP1O14490 977 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 CDC40O60508 579 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ITGA10O75578 1167 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 VNN2O95498 520 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 FGF4P08620 206 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 CLUP10909 449 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 PNLIPRP1P54315 467 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 KIAA0319Q5VV43 1072 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 MAMDC4Q6UXC1 1216 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 TMIGD1Q6UXZ0 262 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 PLCZ1Q86YW0 608 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 MMAAQ8IVH4 418 aaKnown RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 GATAD2BQ8WXI9 593 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF486Q96H40 463 aaPredicted RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 FUBP3Q96I24 572 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 ATOH8Q96SQ7 321 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 GPR62Q9BZJ7 368 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 OR51I1Q9H343 314 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms