RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CLHC1Q8NHS4 586 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 STARD8Q92502 1023 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 TANKQ92844 425 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 ANKRD9Q96BM1 317 aaPredicted RBP12.51□□□□□ -0.41
CNN3-203ENST00000415017 TBC1D20Q96BZ9 403 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 SLC45A3Q96JT2 553 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 FAIM2Q9BWQ8 316 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 DPY30Q9C005 99 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 HCN3Q9P1Z3 774 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 NDOR1Q9UHB4 597 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 NEUROG3Q9Y4Z2 214 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 MAU2Q9Y6X3 613 aa12.51□□□□□ -0.41
CNN3-203ENST00000415017 DYTNA2CJ06 578 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 WASHC1A8K0Z3 465 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 MYO1GB0I1T2 1018 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 FAM227AF5H4B4 570 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 CTNSO60931 367 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 KLF7O75840 302 aaPredicted RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 KLK3P07288 261 aaPredicted RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 FHP07954 510 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 NR2F6P10588 404 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 PIK3R1P27986 724 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 PRDX6P30041 224 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 SLC5A2P31639 672 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 XCR1P46094 333 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 POLR2JP52435 117 aaKnown RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 STX1BP61266 288 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 SHC2P98077 582 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 RHAGQ02094 409 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 SRSF11Q05519 484 aaKnown RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 COL9A2Q14055 689 aaPredicted RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 KRT72Q14CN4 511 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 MLC1Q15049 377 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 RPS6KA2Q15349 733 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 TLR1Q15399 786 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 NKG7Q16617 165 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 OR52E8Q6IFG1 317 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 C6orf15Q6UXA7 325 aaPredicted RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 QSOX2Q6ZRP7 698 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 MSANTD1Q6ZTZ1 278 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 R3HCC1LQ7Z5L2 792 aaKnown RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 METTL27Q8N6F8 245 aaPredicted RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 NATD1Q8N6N6 113 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 FAM47BQ8NA70 645 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 GALNT6Q8NCL4 622 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 PLPP5Q8NEB5 264 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 PEX11GQ96HA9 241 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 SPSB2Q99619 263 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 BHLHE41Q9C0J9 482 aaPredicted RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 RPF2Q9H7B2 306 aaKnown RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 ARMCX1Q9P291 453 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 TRPC4Q9UBN4 977 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 ZNF282Q9UDV7 671 aaPredicted RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 KLK13Q9UKR3 277 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 G3BP2Q9UN86 482 aaKnown RBP12.5□□□□□ -0.41
CNN3-203ENST00000415017 ERVK-11Q9UQG0 969 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 MMACHCQ9Y4U1 282 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 SPACA6W5XKT8 324 aa12.5□□□□□ -0.41
CNN3-203ENST00000415017 FREM2Q5SZK8 3169 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 TEX51A0A1B0GUA7 166 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 ASPDHA6ND91 283 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 TGFBR3LH3BV60 316 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 PRKRAO75569 313 aaKnown RBP12.49□□□□□ -0.41
CNN3-203ENST00000415017 LRATO95237 230 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 IL6P05231 212 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 IFI6P09912 130 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 RAB40ALP0C0E4 278 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 ZGLP1P0C6A0 271 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 LAMP1P11279 417 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 HOXB9P17482 250 aaPredicted RBP12.49□□□□□ -0.41
CNN3-203ENST00000415017 CAPN3P20807 821 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 AGXTP21549 392 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 TLX1P31314 330 aaPredicted RBP12.49□□□□□ -0.41
CNN3-203ENST00000415017 SOX18P35713 384 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 HPCAL1P37235 193 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 ID4P47928 161 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 BIKQ13323 160 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 VWA2Q5GFL6 755 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 COQ5Q5HYK3 327 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 SPANXN4Q5MJ08 99 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 ARHGAP40Q5TG30 622 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 TICAM1Q8IUC6 712 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 ESX1Q8N693 406 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 OR7A2PQ8NGA2 310 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 PSMA8Q8TAA3 256 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 STT3BQ8TCJ2 826 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 COL26A1Q96A83 441 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 CNRIP1Q96F85 164 aaPredicted RBP12.49□□□□□ -0.41
CNN3-203ENST00000415017 CHST8Q9H2A9 424 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 SERHLQ9NQF3 203 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 SLC35C2Q9NQQ7 365 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 C14orf105Q9NVL8 296 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 CCDC167Q9P0B6 97 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 CTSFQ9UBX1 484 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 PADI1Q9ULC6 663 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 CAPN7Q9Y6W3 813 aa12.49□□□□□ -0.41
CNN3-203ENST00000415017 A0A1W2PP18 115 aa12.48□□□□□ -0.41
CNN3-203ENST00000415017 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
CNN3-203ENST00000415017 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms