RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ZNF534Q76KX8 674 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 MON1BQ7L1V2 547 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 SPRED1Q7Z699 444 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 ZNF589Q86UQ0 364 aaPredicted RBP2.39□□□□□ -2.03
MCF2-204ENST00000414978 C1orf52Q8N6N3 182 aaKnown RBP2.39□□□□□ -2.03
MCF2-204ENST00000414978 LRTM2Q8N967 370 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 MCPH1Q8NEM0 835 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 OR52B4Q8NGK2 314 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 OR13J1Q8NGT2 312 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 INPP5DQ92835 1189 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 FBXO32Q969P5 355 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 MOB3AQ96BX8 217 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 CFAP36Q96G28 342 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 TBC1D10AQ9BXI6 508 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 TMEM74BQ9NUR3 256 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.39□□□□□ -2.03
MCF2-204ENST00000414978 GTSE1Q9NYZ3 720 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 PKD2L2Q9NZM6 624 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 UBQLN2Q9UHD9 624 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 CAB39Q9Y376 341 aaPredicted RBP2.39□□□□□ -2.03
MCF2-204ENST00000414978 PTGDR2Q9Y5Y4 395 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 COLEC10Q9Y6Z7 277 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 VWA8A3KMH1 1905 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 A0A0U1RRA0 63 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 KANSL1LA0AUZ9 987 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 RNF222A6NCQ9 220 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 FAM47DPA6NHR8 397 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 E9PQ18 207 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 K7ESM1 405 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 FPGTO14772 594 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 IDH1O75874 414 aaKnown RBP2.38□□□□□ -2.03
MCF2-204ENST00000414978 MFN2O95140 757 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 IVLP07476 585 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 OR2T7P0C7T2 308 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 GNSP15586 552 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 STX2P32856 288 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 CDKN1BP46527 198 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 OR3A1P47881 315 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 CLDN20P56880 219 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 TAS2R38P59533 333 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 TUBA3CQ13748 450 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 NDUFAF5Q5TEU4 345 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 OR4C11Q6IEV9 310 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 PYHIN1Q6K0P9 492 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 TUBA3EQ6PEY2 450 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 Q6YL49 198 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 CACNA2D4Q7Z3S7 1137 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 MRPL10Q7Z7H8 261 aaKnown RBP2.38□□□□□ -2.03
MCF2-204ENST00000414978 TMPRSS12Q86WS5 348 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 FOXRED2Q8IWF2 684 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 UBQLNLQ8IYU4 475 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 SLC7A5P1Q8MH63 180 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 EXD1Q8NHP7 514 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 PPP4R1Q8TF05 950 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 ZNF274Q96GC6 653 aaPredicted RBP2.38□□□□□ -2.03
MCF2-204ENST00000414978 CAMK1GQ96NX5 476 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 NEDD4LQ96PU5 975 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 NPY6RQ99463 290 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 SLC39A3Q9BRY0 314 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 NACAP1Q9BZK3 213 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 TM6SF1Q9BZW5 370 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 CSTL1Q9H114 145 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 DPEP2Q9H4A9 486 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 TMEM231Q9H6L2 316 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 RMND5AQ9H871 391 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 PARD6AQ9NPB6 346 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 B3GAT1Q9P2W7 334 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 PSORS1C1Q9UIG5 152 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 PSME2Q9UL46 239 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 BARX2Q9UMQ3 279 aaPredicted RBP2.38□□□□□ -2.03
MCF2-204ENST00000414978 WDR37Q9Y2I8 494 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 RAI2Q9Y5P3 530 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 WNT6Q9Y6F9 365 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 H0YC42 278 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 OGTO15294 1046 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 SPINT2O43291 252 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 SLC28A2O43868 658 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 KIF5CO60282 957 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 BAG3O95817 575 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 HKR1P10072 659 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 TROVE2P10155 538 aaKnown RBP eCLIP2.38□□□□□ -2.03
MCF2-204ENST00000414978 ITGA2P17301 1181 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 SLC6A6P31641 620 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 PTGS2P35354 604 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 MPLP40238 635 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 NKAIN1Q4KMZ8 207 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 FNBP1LQ5T0N5 605 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 LYPLAL1Q5VWZ2 237 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 SYCE2Q6PIF2 218 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 TAF8Q7Z7C8 310 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 KIAA1328Q86T90 577 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 CDR2LQ86X02 465 aaPredicted RBP2.38□□□□□ -2.03
MCF2-204ENST00000414978 PSTKQ8IV42 348 aaKnown RBP2.38□□□□□ -2.03
MCF2-204ENST00000414978 STHQ8IWL8 128 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 TIGD4Q8IY51 512 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 GPR65Q8IYL9 337 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 VN1R2Q8NFZ6 395 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 OR4K1Q8NGD4 311 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 OR13C2Q8NGS9 318 aa2.38□□□□□ -2.03
MCF2-204ENST00000414978 AKR7LQ8NHP1 331 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms