RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 AHCYP23526 432 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 SEPHS1P49903 392 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 SGCBQ16585 318 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 KCTD8Q6ZWB6 473 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 OR4C15Q8NGM1 316 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 MR1Q95460 341 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 JSRP1Q96MG2 331 aaPredicted RBP11.46□□□□□ -0.58
PTPRF-205ENST00000414879 YIPF4Q9BSR8 244 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF576Q9H609 170 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 GPN1Q9HCN4 374 aaPredicted RBP11.46□□□□□ -0.58
PTPRF-205ENST00000414879 TRPV5Q9NQA5 729 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 NPIPA1Q9UND3 350 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF879B4DU55 563 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 NR4A1P22736 598 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 NKX3-2P78367 333 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 PTGR1Q14914 329 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 TRAM1Q15629 374 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 SHQ1Q6PI26 577 aaKnown RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 Q6ZSR6 202 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 CCDC80Q76M96 950 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 SLC15A3Q8IY34 581 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 POC5Q8NA72 575 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 OR2L5Q8NG80 312 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 OR7G3Q8NG95 312 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 OR4K1Q8NGD4 311 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 KHSRPQ92945 711 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 F2RL3Q96RI0 385 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 POLR2J2Q9GZM3 115 aaKnown RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 MYNNQ9NPC7 610 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 TRIM36Q9NQ86 728 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 ZFR2Q9UPR6 939 aaKnown RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 PCDHGB5Q9Y5G0 923 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 FAM92AA1XBS5 289 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 PRAMEF2O60811 474 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 CPNE3O75131 537 aaKnown RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 RAB36O95755 333 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 CER1O95813 267 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 IGLV3-25P01717 112 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 GSTT2BP0CG30 244 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 MAPK3P27361 379 aaPredicted RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 GNALP38405 381 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 RPS15P62841 145 aaKnown RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 RHAGQ02094 409 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 PLGLB1Q02325 96 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 DSG2Q14126 1118 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 GANABQ14697 944 aaKnown RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 CLCA4Q14CN2 919 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 MFSD13AQ14CX5 517 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 DEFB134Q4QY38 66 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 DDI2Q5TDH0 399 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 IQCHQ86VS3 1027 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 FAM86B1Q8N7N1 296 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 OR52B6Q8NGF0 335 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 TSACCQ96A04 125 aaPredicted RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 OR8D2Q9GZM6 311 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 OR51V1Q9H2C8 321 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 MTHFD2LQ9H903 347 aaPredicted RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 IL21RQ9HBE5 538 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 TCF7L1Q9HCS4 588 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 PCDHB16Q9NRJ7 776 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 MRPL39Q9NYK5 338 aaKnown RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 MRPS7Q9Y2R9 242 aaKnown RBP11.45□□□□□ -0.58
PTPRF-205ENST00000414879 PSME4Q14997 1843 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 SNX4O95219 450 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 OR4D2P58180 307 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 ZBED5Q49AG3 693 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 TPRG1LQ5T0D9 272 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 LYSMD4Q5XG99 296 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 COMMD6Q7Z4G1 85 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 CCDC116Q8IYX3 515 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 SLC22A15Q8IZD6 547 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 ZFPM2Q8WW38 1151 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 ZSWIM3Q96MP5 696 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 TGM7Q96PF1 710 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF559Q9BR84 538 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 TIGARQ9NQ88 270 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 HEBP1Q9NRV9 189 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 OR1A2Q9Y585 309 aa11.45□□□□□ -0.58
PTPRF-205ENST00000414879 A0A1W2PQ72 361 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 A0A1W2PRG6 482 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 A8MU76 341 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 POLR1CO15160 346 aaPredicted RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 IGLV3-27P01718 113 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 POU2F1P14859 743 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ARCN1P48444 511 aaKnown RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 SCN1BQ07699 218 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ELOAQ14241 798 aaKnown RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 MAPK11Q15759 364 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 AQP11Q8NBQ7 271 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ATP6V1C2Q8NEY4 427 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 HDAC2Q92769 488 aaKnown RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 TMEM74Q96NL1 305 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 C1QTNF1Q9BXJ1 281 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 HS3ST3A1Q9Y663 406 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 FOXE1O00358 373 aaPredicted RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 CD38P28907 300 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PDX1P52945 283 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ATP12AP54707 1039 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms