RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TRPC4APQ8TEL6 797 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 ZNF483Q8TF39 744 aaPredicted RBP10.46□□□□□ -0.73
RFFL-204ENST00000414419 TANKQ92844 425 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 NCLNQ969V3 563 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 TMEM125Q96AQ2 219 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 RBM18Q96H35 190 aaKnown RBP10.46□□□□□ -0.73
RFFL-204ENST00000414419 DGAT2Q96PD7 388 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 SIGLEC12Q96PQ1 595 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 NPAS2Q99743 824 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 ERVK-6Q9BXR3 956 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 EPB41L4BQ9H329 900 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 KLHL1Q9NR64 748 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 NMRK1Q9NWW6 199 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 COPS7AQ9UBW8 275 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 PPT2Q9UMR5 302 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 SNX6Q9UNH7 406 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 PCDHGB6Q9Y5F9 930 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 POLEQ07864 2286 aa10.46□□□□□ -0.74
RFFL-204ENST00000414419 RELNP78509 3460 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 PTPN13Q12923 2485 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SPTBN1Q01082 2364 aaKnown RBP10.45□□□□□ -0.74
RFFL-204ENST00000414419 GTF3C1Q12789 2109 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 CLEC18AA5D8T8 446 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SMIM23A6NLE4 172 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 TGFBR3LH3BV60 316 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 GLRA3O75311 464 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SEMA3DO95025 777 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 MLYCDO95822 493 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SP1P08047 785 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SBK3P0C264 359 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 FAM58BPP0C7Q3 252 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 TSPAN8P19075 237 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SLCO1A2P46721 670 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 CCT5P48643 541 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 TNFRSF17Q02223 184 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 ID2Q02363 134 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.74
RFFL-204ENST00000414419 MAPKAPK3Q16644 382 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 ZNF678Q5SXM1 525 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SLC25A25Q6KCM7 469 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 CLEC18BQ6UXF7 455 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 HSDL2Q6YN16 418 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 RPS27LQ71UM5 84 aaKnown RBP10.45□□□□□ -0.74
RFFL-204ENST00000414419 PAGE2Q7Z2X7 111 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 OR4N5Q8IXE1 308 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 TMEM151AQ8N4L1 468 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 CLEC18CQ8NCF0 446 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 MDS2Q8NDY4 140 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 MYRIPQ8NFW9 859 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SSC4DQ8WTU2 575 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 SELENOMQ8WWX9 145 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 NR4A3Q92570 626 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 CCDC126Q96EE4 140 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 TAAR6Q96RI8 345 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 C1QTNF3Q9BXJ4 246 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 OR8D2Q9GZM6 311 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 DDX31Q9H8H2 851 aaKnown RBP10.45□□□□□ -0.74
RFFL-204ENST00000414419 PPIEQ9UNP9 301 aaKnown RBP10.45□□□□□ -0.74
RFFL-204ENST00000414419 SLC12A4Q9UP95 1085 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 STK38LQ9Y2H1 464 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 ATG4BQ9Y4P1 393 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 CLDN16Q9Y5I7 305 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 COL12A1Q99715 3063 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 MYO7BQ6PIF6 2116 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 EML6Q6ZMW3 1958 aa10.45□□□□□ -0.74
RFFL-204ENST00000414419 ICE1Q9Y2F5 2266 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 A0A0A6YYD5 115 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 A0A1W2PPM1 405 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 PROM1O43490 865 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 FGF17O60258 216 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 DLX3O60479 287 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 SEMA7AO75326 666 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 EEDO75530 441 aaKnown RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 ITGA10O75578 1167 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 SLC25A12O75746 678 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 OR4F21O95013 312 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 ETHE1O95571 254 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 KRT6AP02538 564 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 GBAP04062 536 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 KRT6BP04259 564 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 SHBGP04278 402 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 NR2F6P10588 404 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 IMPDH1P20839 514 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 HMOX2P30519 316 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 BSGP35613 385 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 HSD17B3P37058 310 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 STT3AP46977 705 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 KRT6CP48668 564 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 HLCSP50747 726 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 SSR4P51571 173 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 GPR143P51810 404 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 HNRNPH2P55795 449 aaKnown RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 PLIN5Q00G26 463 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 FOLH1Q04609 750 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 RASA2Q15283 850 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 UNC50Q53HI1 259 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 CCNYL2Q5T2Q4 361 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 C18orf63Q68DL7 685 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 GFRALQ6UXV0 394 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 GALNTL5Q7Z4T8 443 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms