RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SLC3A1Q07837 685 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 C17orf107Q6ZR85 190 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 PIWIL3Q7Z3Z3 882 aaKnown RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 FAM131BQ86XD5 332 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 AQP12AQ8IXF9 295 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 KIAA0895Q8NCT3 520 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 C17orf47Q8NEP4 570 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 OR52B6Q8NGF0 335 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 SPPL2AQ8TCT8 520 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 NPRL2Q8WTW4 380 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 SEPT8Q92599 483 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC35C1Q96A29 364 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 BPIFA2Q96DR5 249 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 IDI2Q9BXS1 227 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 UBXN6Q9BZV1 441 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 TRIM7Q9C029 511 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 TRIM6Q9C030 488 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC39A8Q9C0K1 460 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 TUBB1Q9H4B7 451 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 ABCB8Q9NUT2 735 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 TMOD3Q9NYL9 352 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 PLCL2Q9UPR0 1127 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 TMED7Q9Y3B3 224 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 CDC42BPGQ6DT37 1551 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 LRPPRCP42704 1394 aaKnown RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 DLG5Q8TDM6 1919 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 RGPD1P0DJD0 1748 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CRYBG1Q9Y4K1 1723 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CD163L1Q9NR16 1453 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CHD2O14647 1828 aaKnown RBP3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 DIP2AQ14689 1571 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CEP170BQ9Y4F5 1589 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 IGLV4-3A0A075B6K6 122 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 FAM149AA5PLN7 773 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 H0YIG0 161 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CCER2I3L3R5 266 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 M0R296 226 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 INPP4BO15327 924 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 GLCEO94923 617 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 PCP11498 1178 aaKnown RBP3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 SHC1P29353 583 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 TNNT3P45378 269 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 PRELPP51888 382 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 BTG1P62324 171 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 FKBP3Q00688 224 aaKnown RBP3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 MS4A2Q01362 244 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CEACAM7Q14002 265 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF146Q15072 292 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 MLF2Q15773 248 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 FUT11Q495W5 492 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CCDC158Q5M9N0 1113 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 LRRC38Q5VT99 294 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 GPRIN3Q6ZVF9 776 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 RFPL4BQ6ZWI9 263 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CARM1Q86X55 608 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CLYBLQ8N0X4 340 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC43A2Q8N370 569 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 ATP8B4Q8TF62 1192 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 FAM222BQ8WU58 562 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CDKN2AIPNLQ96HQ2 116 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 PINK1Q9BXM7 581 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 C2orf40Q9H1Z8 148 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZDHHC6Q9H6R6 413 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 ARGLU1Q9NWB6 273 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 CNIH4Q9P003 139 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 KANK1Q14678 1352 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 PEAK1Q9H792 1746 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 STRCP1A6NGW2 1772 aa3.1□□□□□ -1.91
HMGB1P11-201ENST00000413899 XIRP1Q702N8 1843 aaKnown RBP3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 COL2A1P02458 1487 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 ARHGAP23Q9P227 1491 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLIT1O75093 1534 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 NWD1Q149M9 1564 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 C13orf42A0A1B0GVH6 325 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 FAM170AA1A519 330 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 MAGEB16A2A368 324 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 A8MU76 341 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 ARHGEF33A8MVX0 844 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 A8MXK9 166 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 TGDSO95455 350 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 GATA1P15976 413 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 ACKR3P25106 362 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 FCGR2BP31994 310 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 FCGR2CP31995 323 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 CAPGP40121 348 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 BACE1P56817 501 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 EVCP57679 992 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 STX1BP61266 288 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 LMO4P61968 165 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC34A1Q06495 639 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 ENPP2Q13822 863 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 GCKRQ14397 625 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 NFE2L1Q14494 772 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLMAPQ14BN4 828 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 SIGLEC15Q6ZMC9 328 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 CDHR3Q6ZTQ4 885 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 CYP4V2Q6ZWL3 525 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 NLRP14Q86W24 1093 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 RNF130Q86XS8 419 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms