RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 ADAMTS18Q8TE60 1221 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 NCLNQ969V3 563 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 ANKRD9Q96BM1 317 aaPredicted RBP12.28□□□□□ -0.44
SSB-203ENST00000413002 PPWD1Q96BP3 646 aaKnown RBP12.28□□□□□ -0.44
SSB-203ENST00000413002 L3HYPDHQ96EM0 354 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 ZNF382Q96SR6 550 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 SERPINI1Q99574 410 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 LIN28AQ9H9Z2 209 aaKnown RBP12.28□□□□□ -0.44
SSB-203ENST00000413002 TRPS1Q9UHF7 1281 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 ZNF223Q9UK11 482 aaPredicted RBP12.28□□□□□ -0.44
SSB-203ENST00000413002 ASB4Q9Y574 426 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 PCDHGA10Q9Y5H3 936 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 SPACA6W5XKT8 324 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 FLNCQ14315 2725 aa12.28□□□□□ -0.44
SSB-203ENST00000413002 TRBV11-1A0A0K0K1C0 115 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 A0A1W2PS29 197 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 PROM1O43490 865 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 TNNI3P19429 210 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 GNLYP22749 145 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 DEKP35659 375 aaKnown RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 TNFSF10P50591 281 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 FOXA1P55317 472 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 AP2B1P63010 937 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 TNFRSF17Q02223 184 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 LCP2Q13094 533 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 TLR1Q15399 786 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 CCDC153Q494R4 210 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 ZNF468Q5VIY5 522 aaPredicted RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 MRM1Q6IN84 353 aaKnown RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 C16orf47Q6ZP98 133 aaPredicted RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 DGAT2L6Q6ZPD8 337 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 TRABD2AQ86V40 505 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 NUDT13Q86X67 352 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 C10orf107Q8IVU9 208 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 ZCCHC7Q8N3Z6 543 aaKnown RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 BANPQ8N9N5 519 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 APCDD1LQ8NCL9 501 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 METTL6Q8TCB7 284 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 PTPMT1Q8WUK0 201 aaPredicted RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 HAS2Q92819 552 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 ZNF354BQ96LW1 612 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 RPF2Q9H7B2 306 aaKnown RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 DDX31Q9H8H2 851 aaKnown RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 TNFRSF12AQ9NP84 129 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 MID1IP1Q9NPA3 183 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 TEX10Q9NXF1 929 aaPredicted RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 SLC17A7Q9P2U7 560 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 LGALS13Q9UHV8 139 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 TEKT2Q9UIF3 430 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 SNX6Q9UNH7 406 aa12.27□□□□□ -0.45
SSB-203ENST00000413002 COPG1Q9Y678 874 aaKnown RBP12.27□□□□□ -0.45
SSB-203ENST00000413002 OR5H15A6NDH6 313 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 GABRR3A8MPY1 467 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 TCP11X1B4DZS4 312 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 PGRMC2O15173 223 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 PRKNO60260 465 aaPredicted RBP12.26□□□□□ -0.45
SSB-203ENST00000413002 MLYCDO95822 493 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 AIFM1O95831 613 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 TPP2P29144 1249 aaPredicted RBP12.26□□□□□ -0.45
SSB-203ENST00000413002 SERPINB3P29508 390 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 HMOX2P30519 316 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 CD96P40200 585 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 TSFMP43897 325 aaKnown RBP12.26□□□□□ -0.45
SSB-203ENST00000413002 TAS2R50P59544 299 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 HMGCS1Q01581 520 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 FOLH1Q04609 750 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 MRPL49Q13405 166 aaKnown RBP12.26□□□□□ -0.45
SSB-203ENST00000413002 TUBA3CQ13748 450 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 MEP1AQ16819 746 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 CCNYL2Q5T2Q4 361 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 SPINK14Q6IE38 97 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 TUBA3EQ6PEY2 450 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 COMMD6Q7Z4G1 85 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 RPS19BP1Q86WX3 136 aaKnown RBP12.26□□□□□ -0.45
SSB-203ENST00000413002 MMP21Q8N119 569 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 METTL4Q8N3J2 472 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 SLC5A8Q8N695 610 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 B3GNT7Q8NFL0 401 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 APOPT1Q96IL0 206 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 SIGLEC12Q96PQ1 595 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 FAM111AQ96PZ2 611 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 HES7Q9BYE0 225 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 DEFB126Q9BYW3 111 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 ROPN1BQ9BZX4 212 aaPredicted RBP12.26□□□□□ -0.45
SSB-203ENST00000413002 OR8D2Q9GZM6 311 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 CLMPQ9H6B4 373 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 ROPN1Q9HAT0 212 aaPredicted RBP12.26□□□□□ -0.45
SSB-203ENST00000413002 ADAP2Q9NPF8 381 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 KLHL1Q9NR64 748 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 OXSMQ9NWU1 459 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 PSD3Q9NYI0 1048 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 VTI1BQ9UEU0 232 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 PHF11Q9UIL8 331 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 RAB21Q9UL25 225 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 PLLPQ9Y342 182 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 CLCA3PQ9Y6N3 262 aa12.26□□□□□ -0.45
SSB-203ENST00000413002 C17orf105B2RV13 164 aa12.25□□□□□ -0.45
SSB-203ENST00000413002 HRKO00198 91 aa12.25□□□□□ -0.45
SSB-203ENST00000413002 VPS4BO75351 444 aa12.25□□□□□ -0.45
SSB-203ENST00000413002 ULK1O75385 1050 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms