RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 OR14I1A6ND48 311 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 SEPT4O43236 478 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 FGBP02675 491 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 ETV6P41212 452 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 HSPB3Q12988 150 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 FCN2Q15485 313 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 CHRNA6Q15825 494 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 SAXO2Q658L1 398 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 METAP1DQ6UB28 335 aaPredicted RBP13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF433Q8N7K0 673 aaPredicted RBP13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 ARRDC2Q8TBH0 407 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 TXNL4BQ9NX01 149 aaKnown RBP13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 COL24A1Q17RW2 1714 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 TRIM64BA6NI03 449 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 KPNA3O00505 521 aaPredicted RBP13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 DSCR3O14972 297 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 PNLIPRP1P54315 467 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 GANCQ8TET4 914 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 PITX2Q99697 317 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 CACNG2Q9Y698 323 aa13.32□□□□□ -0.28
CLTCL1-201ENST00000412649 IQCMA0A1B0GVH7 501 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 FAM86C2PA6NEL3 165 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 PRRG1O14668 218 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 UBL4AP11441 157 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 WEE1P30291 646 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 RPL34P49207 117 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 SNTB2Q13425 540 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 CFAP77Q6ZQR2 320 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 BRD7Q9NPI1 651 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 ACSL5Q9ULC5 683 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 NDRG2Q9UN36 371 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 PCDHB7Q9Y5E2 793 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 SAP18O00422 153 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 CACNG3O60359 315 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 KCNK5O95279 499 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 CH25HO95992 272 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 PROS1P07225 676 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF140P52738 457 aaPredicted RBP13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 GJD3Q8N144 294 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 TMIEQ8NEW7 156 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 RBPMSQ93062 196 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 SLX1AQ9BQ83 275 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 NTMT1Q9BV86 223 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 CXCL16Q9H2A7 254 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 ASAH2Q9NR71 780 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 NUBP2Q9Y5Y2 271 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 AP1M2Q9Y6Q5 423 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 QSOX1O00391 747 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 GNB5O14775 395 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 ALAS2P22557 587 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 CAV3P56539 151 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF91Q05481 1191 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 CHFRQ96EP1 664 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 CDCA5Q96FF9 252 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 THAP7Q9BT49 309 aaPredicted RBP13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 GABARAPL3Q9BY60 117 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 TRIM36Q9NQ86 728 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 MGAT4CQ9UBM8 478 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 SCML2Q9UQR0 700 aa13.31□□□□□ -0.28
CLTCL1-201ENST00000412649 CSF3P09919 207 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 CLEC2LP0C7M8 214 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 SNRPD1P62314 119 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 EIF2B5Q13144 721 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 GRK1Q15835 563 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 TOR1AIP1Q5JTV8 583 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC25A25Q6KCM7 469 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 RTL4Q6ZR62 310 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 DCLRE1CQ96SD1 692 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 ARHGAP39Q9C0H5 1083 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 ZDHHC6Q9H6R6 413 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC25A13Q9UJS0 675 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 CCL15-CCL14A0A0B4J2E2 113 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 SCAMP2O15127 329 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 CHMP24386 653 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 TACR1P25103 407 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 RAB8AP61006 207 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 POLR2LP62875 67 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 CCL15Q16663 113 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 RAB41Q5JT25 222 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 PDZD9Q8IXQ8 264 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 ADAMTS19Q8TE59 1207 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 EXOSC8Q96B26 276 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 ELMOD3Q96FG2 381 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF436Q9C0F3 470 aaPredicted RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 ENTPD4Q9Y227 616 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 SMPD1P17405 629 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 CORO1AP31146 461 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 MAGEA11P43364 429 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 YBX1P67809 324 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 RGMBQ6NW40 437 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 VN1R5Q7Z5H4 357 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 IQCF1Q8N6M8 205 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 OR52P1PQ8NH57 321 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 TM9SF2Q99805 663 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 NIPSNAP1Q9BPW8 284 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 MCMBPQ9BTE3 642 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 CDCA4Q9BXL8 241 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 ZDHHC3Q9NYG2 299 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms