RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 TOP3AQ13472 1001 aaPredicted RBP23.29■■□□□ 1.32
VRK2-202ENST00000412104 CYP27C1Q4G0S4 372 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 TOR1AIP1Q5JTV8 583 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 C6orf120Q7Z4R8 191 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 SLC44A3Q8N4M1 653 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 TTC29Q8NA56 475 aaPredicted RBP23.29■■□□□ 1.32
VRK2-202ENST00000412104 SMYD1Q8NB12 490 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 MFSD9Q8NBP5 474 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 OR8K5Q8NH50 307 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 PSMA8Q8TAA3 256 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 GEMIN6Q8WXD5 167 aaKnown RBP23.29■■□□□ 1.32
VRK2-202ENST00000412104 DNASE1L2Q92874 299 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 ISOC1Q96CN7 298 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 FAIM2Q9BWQ8 316 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 KCNK12Q9HB15 430 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 PRDM7Q9NQW5 492 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 EHD3Q9NZN3 535 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 PCOLCE2Q9UKZ9 415 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 RAB23Q9ULC3 237 aa23.29■■□□□ 1.32
VRK2-202ENST00000412104 MDC1Q14676 2089 aaKnown RBP23.29■■□□□ 1.32
VRK2-202ENST00000412104 TNFRSF11BO00300 401 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 PRAMEF10O60809 474 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 PRKRAO75569 313 aaKnown RBP23.28■■□□□ 1.32
VRK2-202ENST00000412104 TRMUO75648 421 aaKnown RBP23.28■■□□□ 1.32
VRK2-202ENST00000412104 HIST1H1TP22492 207 aaPredicted RBP23.28■■□□□ 1.32
VRK2-202ENST00000412104 SLC9A5Q14940 896 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 MLC1Q15049 377 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 ABHD17CQ6PCB6 329 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 TDHQ8IZJ6 230 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 CNIH3Q8TBE1 160 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 KCNC2Q96PR1 638 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 KLF15Q9UIH9 416 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 MTCH2Q9Y6C9 303 aa23.28■■□□□ 1.32
VRK2-202ENST00000412104 RASGRP1O95267 797 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 BCHEP06276 602 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 SLAMF1Q13291 335 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 CDK5R2Q13319 367 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 COL19A1Q14993 1142 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 ARMC8Q8IUR7 673 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 OR2L5Q8NG80 312 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 SLC38A5Q8WUX1 472 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 TUBA1CQ9BQE3 449 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 EBF1Q9UH73 591 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 MMP17Q9ULZ9 603 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 CDC14AQ9UNH5 594 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 SNX7Q9UNH6 387 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 GMPPBQ9Y5P6 360 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 LRP4O75096 1905 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 ZNF701M0R085 212 aaPredicted RBP23.27■■□□□ 1.32
VRK2-202ENST00000412104 TNFRSF10CO14798 259 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 AXIN1O15169 862 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 HTR1AP08908 422 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 JUNBP17275 347 aaPredicted RBP23.27■■□□□ 1.32
VRK2-202ENST00000412104 ITGA2P17301 1181 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 CCT3P49368 545 aaKnown RBP23.27■■□□□ 1.32
VRK2-202ENST00000412104 SPIBQ01892 262 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 RPS26P11Q5JNZ5 115 aaPredicted RBP23.27■■□□□ 1.32
VRK2-202ENST00000412104 ACOT4Q8N9L9 421 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 OR4C15Q8NGM1 316 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 AMDHD1Q96NU7 426 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 GLIPR2Q9H4G4 154 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 LIN28AQ9H9Z2 209 aaKnown RBP23.27■■□□□ 1.32
VRK2-202ENST00000412104 FANCEQ9HB96 536 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 SLC35C2Q9NQQ7 365 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 NDRG4Q9ULP0 352 aaKnown RBP23.27■■□□□ 1.32
VRK2-202ENST00000412104 ZNF451Q9Y4E5 1061 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 ASB4Q9Y574 426 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 HSPE1-MOB4S4R3N1 261 aa23.27■■□□□ 1.32
VRK2-202ENST00000412104 C5orf58C9J3I9 102 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 H3BQ06 376 aaPredicted RBP23.26■■□□□ 1.31
VRK2-202ENST00000412104 BTN3A3O00478 584 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 MAN2B1O00754 1011 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 SH3BP5O60239 455 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 ATP5A1P25705 553 aaKnown RBP23.26■■□□□ 1.31
VRK2-202ENST00000412104 EPHA2P29317 976 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 ARFIP1P53367 373 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 TP53BP2Q13625 1128 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 CCINQ13939 588 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 XAF1Q6GPH4 301 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 MRM1Q6IN84 353 aaKnown RBP23.26■■□□□ 1.31
VRK2-202ENST00000412104 GIPC3Q8TF64 312 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 ZNF566Q969W8 418 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 TMEM19Q96HH6 336 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 APOBEC3BQ9UH17 382 aaKnown RBP23.26■■□□□ 1.31
VRK2-202ENST00000412104 FANCMQ8IYD8 2048 aa23.26■■□□□ 1.31
VRK2-202ENST00000412104 TRBV23OR9-2A0A075B6M9 112 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 A6NCN8 305 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 GLOD5A6NK44 160 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 SHISA7A6NL88 538 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 WASHC1A8K0Z3 465 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 HMGN4O00479 90 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 DNAJB5O75953 348 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 AKT2P31751 481 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 SLC19A1P41440 591 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 CDH12P55289 794 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 SRP54P61011 504 aaKnown RBP23.25■■□□□ 1.31
VRK2-202ENST00000412104 ALG11Q2TAA5 492 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 FBXO43Q4G163 708 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 PAQR7Q86WK9 346 aa23.25■■□□□ 1.31
VRK2-202ENST00000412104 ERI1Q8IV48 349 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms