RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 DOC2BQ14184 412 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 PDZD3Q86UT5 571 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 SLC22A16Q86VW1 577 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 LACC1Q8IV20 430 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 PLA2G15Q8NCC3 412 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 SPPL3Q8TCT6 385 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 F2RL3Q96RI0 385 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 A4GALTQ9NPC4 353 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 QPCTLQ9NXS2 382 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 AHSPQ9NZD4 102 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 SCHIP1Q9P0W5 487 aaPredicted RBP15.11■□□□□ 0.01
HOXD3-202ENST00000410016 KLK4Q9Y5K2 254 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 C5orf42Q9H799 3197 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 TAF4O00268 1085 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 KIAA0355O15063 1070 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 TBX19O60806 448 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 ATP6V1G1O75348 118 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 UPK1BO75841 260 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 SEMA3DO95025 777 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 DBTP11182 482 aaKnown RBP15.11■□□□□ 0.01
HOXD3-202ENST00000410016 CNR2P34972 360 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 SLC15A1P46059 708 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 PCBP4P57723 403 aaKnown RBP15.11■□□□□ 0.01
HOXD3-202ENST00000410016 TMEM52BQ4KMG9 183 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 COLEC12Q5KU26 742 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 TCTN3Q6NUS6 607 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 TNFAIP8L2Q6P589 184 aaPredicted RBP15.11■□□□□ 0.01
HOXD3-202ENST00000410016 TUBA3EQ6PEY2 450 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 ERN2Q76MJ5 926 aaKnown RBP15.11■□□□□ 0.01
HOXD3-202ENST00000410016 SFTPA1Q8IWL2 248 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 CELF5Q8N6W0 485 aaKnown RBP15.11■□□□□ 0.01
HOXD3-202ENST00000410016 AMER2Q8N7J2 671 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 OR8D1Q8WZ84 308 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 OR5P2Q8WZ92 322 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 TFGQ92734 400 aaPredicted RBP15.11■□□□□ 0.01
HOXD3-202ENST00000410016 COX14Q96I36 57 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 OR5M11Q96RB7 305 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 MENTQ9BUN1 341 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 MS4A8Q9BY19 250 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 LHX9Q9NQ69 397 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 CNOT2Q9NZN8 540 aaKnown RBP15.11■□□□□ 0.01
HOXD3-202ENST00000410016 REV1Q9UBZ9 1251 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 TAC3Q9UHF0 121 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 ENOPH1Q9UHY7 261 aa15.11■□□□□ 0.01
HOXD3-202ENST00000410016 CDH23Q9H251 3354 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 LOC100506127A0A0U1RQW1 187 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 BMPR1AP36894 532 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 FRKP42685 505 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 MAPK12P53778 367 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 MANFP55145 182 aaKnown RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 OLR1P78380 273 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 ELAVL3Q14576 367 aaKnown RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 GAB4Q2WGN9 574 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 LEXMQ3ZCV2 418 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 DSG4Q86SJ6 1040 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 LYSMD2Q8IV50 215 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 DCUN1D3Q8IWE4 304 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 PPP1R16AQ96I34 528 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 SIRT3Q9NTG7 399 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 CUEDC1Q9NWM3 386 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 WBP11Q9Y2W2 641 aaKnown RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 TCF20Q9UGU0 1960 aaKnown RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 EDDM13A0A1B0GTR0 161 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 EFCAB10A6NFE3 127 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 ANKDD1BA6NHY2 528 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 ZW10O43264 779 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 ADH1CP00326 375 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 BCHEP06276 602 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 HNRNPA1P09651 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 OPRD1P41143 372 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 VIPR2P41587 438 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 RPA4Q13156 261 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 CAMK1Q14012 370 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 SEC23BQ15437 767 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 FNDC3BQ53EP0 1204 aaKnown RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 PTCHD4Q6ZW05 846 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 AMZ2Q86W34 360 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 ATCAYQ86WG3 371 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 ZNF707Q96C28 371 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 TMEM19Q96HH6 336 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 C6orf62Q9GZU0 229 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 CXXC1Q9P0U4 656 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-202ENST00000410016 C5AR2Q9P296 337 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 UGT2A1Q9Y4X1 527 aa15.1■□□□□ 0.01
HOXD3-202ENST00000410016 ISPDA4D126 451 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 MPZL2O60487 215 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 DGKEP52429 567 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 ZNF367Q7RTV3 350 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 C17orf64Q86WR6 236 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 C9orf43Q8TAL5 461 aaPredicted RBP15.09■□□□□ 0.01
HOXD3-202ENST00000410016 RAB8BQ92930 207 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 ZFYVE19Q96K21 471 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 WFDC6Q9BQY6 131 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 CHCHD6Q9BRQ6 235 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 TMEM245Q9H330 911 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 RMI1Q9H9A7 625 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 SLC25A19Q9HC21 320 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 FZD3Q9NPG1 666 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 WASH6PQ9NQA3 447 aa15.09■□□□□ 0.01
HOXD3-202ENST00000410016 CCDC59Q9P031 241 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms