RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 HTR3DQ70Z44 454 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 SPATC1Q76KD6 591 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PRSS48Q7RTY5 328 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 TCAIMQ8N3R3 496 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 AMER2Q8N7J2 671 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 WDR36Q8NI36 951 aaKnown RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF675Q8TD23 568 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 SLC38A4Q969I6 547 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 YIPF6Q96EC8 236 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF300Q96RE9 604 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 SLX1AQ9BQ83 275 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 EHD3Q9NZN3 535 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 SEC14L3Q9UDX4 400 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 POU2F3Q9UKI9 436 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ANGPT4Q9Y264 503 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 B3GNT3Q9Y2A9 372 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PRRC2CQ9Y520 2896 aaKnown RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PRAMEF10O60809 474 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 RASGRP1O95267 797 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 CBSLP0DN79 551 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 S100A1P23297 94 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 CBSP35520 551 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PBX2P40425 430 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 HNMTP50135 292 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PIN1Q13526 163 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 RGNQ15493 299 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 AQP11Q8NBQ7 271 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 DNAJB8Q8NHS0 232 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ARRDC3Q96B67 414 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 STARD5Q9NSY2 213 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 NDRG4Q9ULP0 352 aaKnown RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 TMCC3Q9ULS5 477 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PCDHGA6Q9Y5G7 932 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 SDK2Q58EX2 2172 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 TRBV5-4A0A0C4DH59 114 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 GFRA2O00451 464 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 TCEA1P23193 301 aaKnown RBP12.77□□□□□ -0.36
COL6A2-204ENST00000409416 WNT3P56703 355 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 GPM6BQ13491 265 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 SYT6Q5T7P8 510 aaPredicted RBP12.77□□□□□ -0.36
COL6A2-204ENST00000409416 FAAH2Q6GMR7 532 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF783Q6ZMS7 281 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.77□□□□□ -0.36
COL6A2-204ENST00000409416 ARMC8Q8IUR7 673 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 IQCF2Q8IXL9 164 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 MFSD4AQ8N468 514 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 SLC43A3Q8NBI5 491 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 NUAK2Q9H093 628 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.77□□□□□ -0.36
COL6A2-204ENST00000409416 FAM120CQ9NX05 1096 aaKnown RBP12.77□□□□□ -0.36
COL6A2-204ENST00000409416 DKK3Q9UBP4 350 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 CARD8Q9Y2G2 431 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 IRAK3Q9Y616 596 aa12.77□□□□□ -0.36
COL6A2-204ENST00000409416 GBF1Q92538 1859 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 PIPSLA2A3N6 862 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 SCAMP2O15127 329 aaKnown RBP12.77□□□□□ -0.37
COL6A2-204ENST00000409416 PTHP01270 115 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 OR12D1P0DN82 309 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 PTPN5P54829 565 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 ITGA1P56199 1179 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.37
COL6A2-204ENST00000409416 TSTQ16762 297 aaKnown RBP12.77□□□□□ -0.37
COL6A2-204ENST00000409416 POMZP3Q6PJE2 187 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 SCAIQ8N9R8 606 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 OVCA2Q8WZ82 227 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 TSACCQ96A04 125 aaPredicted RBP12.77□□□□□ -0.37
COL6A2-204ENST00000409416 MAGEB10Q96LZ2 347 aaPredicted RBP12.77□□□□□ -0.37
COL6A2-204ENST00000409416 DOHHQ9BU89 302 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 SEMA3GQ9NS98 782 aa12.77□□□□□ -0.37
COL6A2-204ENST00000409416 KCNE1BA0A087WTH5 132 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 A0A1W2PS29 197 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 OR2A25A4D2G3 310 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 ADH1CP00326 375 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 NR4A2P43354 598 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 LSM11P83369 360 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 CDK6Q00534 326 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 ZC3H12BQ5HYM0 836 aaKnown RBP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 PRR23CQ6ZRP0 262 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 GATAD2AQ86YP4 633 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 AMER3Q8N944 861 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 MRPL43Q8N983 215 aaKnown RBP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 FGF13Q92913 245 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 ERVK13-1Q9NX77 482 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 NDRG2Q9UN36 371 aaKnown RBP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 NPIPA5A0A0B4J1W7 369 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 OR2W5A6NFC9 320 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 NPIPA7E9PJI5 369 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 WWP2O00308 870 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 LRRTM2O43300 516 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 GADD45GO95257 159 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 IGHA2P01877 340 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 FCER2P06734 321 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 ALOX5P09917 674 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 NPIPA8P0DM63 369 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 TYRP1P17643 537 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 GPX2P18283 190 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 IL12RB1P42701 662 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 580 ms