RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 ATG16L2Q8NAA4 619 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 OR7G3Q8NG95 312 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 FANK1Q8TC84 345 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 KCTD4Q8WVF5 259 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 UFD1Q92890 307 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 LENG9Q96B70 501 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 HYLS1Q96M11 299 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 RBBP8Q99708 897 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 PELOQ9BRX2 385 aaKnown RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 TRMOQ9BU70 441 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ITPAQ9BY32 194 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 UGT2B28Q9BY64 529 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ALOXE3Q9BYJ1 711 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 UCK2Q9BZX2 261 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ROGDIQ9GZN7 287 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 CXorf36Q9H7Y0 433 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 MEAF6Q9HAF1 191 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 C3orf14Q9HBI5 128 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 GALNT9Q9HCQ5 603 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 TMEM45AQ9NWC5 275 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 FAM118AQ9NWS6 357 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 MTMR4Q9NYA4 1195 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 LRFN1Q9P244 771 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 SLCO3A1Q9UIG8 710 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ACSL5Q9ULC5 683 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 NDRG4Q9ULP0 352 aaKnown RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 DIMT1Q9UNQ2 313 aaKnown RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 USP22Q9UPT9 525 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 KLHL20Q9Y2M5 609 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 KLF2Q9Y5W3 355 aaPredicted RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 SIPA1L1O43166 1804 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 FOCADQ5VW36 1801 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 MYH9P35579 1960 aaKnown RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 C2CD3Q4AC94 2353 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 A0A075B6Q4 140 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 FAM149AA5PLN7 773 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 OR6C70A6NIJ9 312 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 PCP4L1A6NKN8 68 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 HACD1B0YJ81 288 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 PRSS44E7EML9 344 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SYT5O00445 386 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 MED7O43513 233 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 AIREO43918 545 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 ATG13O75143 517 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 LRCH4O75427 683 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SNAPC5O75971 98 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SLC22A5O76082 557 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 ANGPTL1O95841 491 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 ECDO95905 644 aaPredicted RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 RPLP0P05388 317 aaKnown RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 HTR1AP08908 422 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SLC2A3P11169 496 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 CYP2A6P11509 494 aaPredicted RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 ICAM2P13598 275 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 PLA2G2AP14555 144 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 CD36P16671 472 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 IL7RP16871 459 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 TNNI3P19429 210 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 C4BPBP20851 252 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 HTR1EP28566 365 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 CD6P30203 668 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 CDH5P33151 784 aaPredicted RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 SHMT1P34896 483 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 GGT5P36269 586 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 PPP3CCP48454 512 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 NPY2RP49146 381 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 TPMTP51580 245 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 GBX2P52951 348 aaPredicted RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 CDH13P55290 713 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SSTP61278 116 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 EMX1Q04741 257 aaPredicted RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 CHRNB3Q05901 458 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SCN1BQ07699 218 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 MAB21L1Q13394 359 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 ASAH1Q13510 395 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 KCNAB1Q14722 419 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 QPRTQ15274 297 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 MAPKAPK3Q16644 382 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 IMPG1Q17R60 797 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 BTBD16Q32M84 506 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 BEAN1Q3B7T3 259 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 PRAMEF19Q5SWL8 479 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 TMEM198Q66K66 360 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SP5Q6BEB4 398 aaPredicted RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 ZNF470Q6ECI4 717 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 RGS7BPQ6MZT1 257 aaPredicted RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 MZT2AQ6P582 158 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SHQ1Q6PI26 577 aaKnown RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 TTLL10Q6ZVT0 673 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 LUZP2Q86TE4 346 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 ADGRG3Q86Y34 549 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 RASGRP3Q8IV61 690 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 EID3Q8N140 333 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 GPD1LQ8N335 351 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 ATAD1Q8NBU5 361 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 FAM83FQ8NEG4 500 aaPredicted RBP5.22□□□□□ -1.57
CLK1-202ENST00000409403 OR5T2Q8NGG2 359 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 AGR3Q8TD06 166 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 FAM84BQ96KN1 310 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms