RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SMN1Q16637 294 aaKnown RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 ALG11Q2TAA5 492 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 FAM46CQ5VWP2 391 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 AGTRAPQ6RW13 159 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 TP53INP2Q8IXH6 220 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 SYT14Q8NB59 555 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 DUS3LQ96G46 650 aaKnown RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 RSPH9Q9H1X1 276 aaPredicted RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 KCNN3Q9UGI6 736 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 SH2B3Q9UQQ2 575 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 ERVK-19Q9WJR5 959 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 PLEKHA6Q9Y2H5 1048 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 LOC105369274A0A096LPK9 316 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 SCN2BO60939 215 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 STBD1O95210 358 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 RPS17P08708 135 aaKnown RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 SF1Q15637 639 aaKnown RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 TMEM69Q5SWH9 247 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 TREML2Q5T2D2 321 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 B3GNT9Q6UX72 402 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 ZNF534Q76KX8 674 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 BTN2A1Q7KYR7 527 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 GALNT10Q86SR1 603 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 OR4N4Q8N0Y3 316 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 ZSCAN1Q8NBB4 408 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 SLC7A6Q92536 515 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 CNOT9Q92600 299 aaKnown RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 NKD1Q969G9 470 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 MKKSQ9NPJ1 570 aaPredicted RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 MRPS33Q9Y291 106 aaKnown RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 TREHO43280 583 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 SCGNO76038 276 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 SSTR4P31391 388 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 GRIN2CQ14957 1233 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 OCLNQ16625 522 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 CCDC58Q4VC31 144 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 ELP2Q6IA86 826 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 METAP1DQ6UB28 335 aaPredicted RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 GGHQ92820 318 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 OR2M2Q96R28 347 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 ARHGAP39Q9C0H5 1083 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 RBFOX1Q9NWB1 397 aaKnown RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 DLGAP4Q9Y2H0 992 aa16.97■□□□□ 0.31
SMPD4-202ENST00000409031 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
SMPD4-202ENST00000409031 C1QTNF3-AMACRE9PGA6 284 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 ALPIP09923 528 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 DRD5P21918 477 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 BMP8BP34820 402 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 CDKN2CP42773 168 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 ZNF157P51786 506 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 RPS13P62277 151 aaKnown RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 PCBP2Q15366 365 aaKnown RBP eCLIP16.96■□□□□ 0.313e-6■■■■□ 25.6
SMPD4-202ENST00000409031 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 SLC46A3Q7Z3Q1 461 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 BMP8AQ7Z5Y6 402 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 SERPINA11Q86U17 422 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 KLBQ86Z14 1044 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 BEST3Q8N1M1 668 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 RIT1Q92963 219 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 UHRF1Q96T88 793 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 SIGLEC1Q9BZZ2 1709 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 OR1I1O60431 355 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 SOX3P41225 446 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 KLHL26Q53HC5 615 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 ZCCHC12Q6PEW1 402 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 ZFP41Q8N8Y5 198 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 DTX3Q8N9I9 347 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 C7orf50Q9BRJ6 194 aaKnown RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 METTL8Q9H825 291 aaKnown RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 IMP3Q9NV31 184 aaKnown RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 TEX10Q9NXF1 929 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 KDM3BQ7LBC6 1761 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 A0A1B0GTW7 788 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 C13orf42A0A1B0GVH6 325 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 ZNF705EA8MWA4 302 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 SFRP4Q6FHJ7 346 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 DUS2Q9NX74 493 aaKnown RBP16.96■□□□□ 0.31
SMPD4-202ENST00000409031 ABCD2Q9UBJ2 740 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 CORINQ9Y5Q5 1042 aa16.96■□□□□ 0.31
SMPD4-202ENST00000409031 WASHC1A8K0Z3 465 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 SYN3O14994 580 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 GATBO75879 557 aaKnown RBP16.96■□□□□ 0.3
SMPD4-202ENST00000409031 NT5EP21589 574 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 GABRB3P28472 473 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 RRAS2P62070 204 aaPredicted RBP16.96■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF789Q5FWF6 425 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 MS4A13Q5J8X5 152 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 C1QTNF12Q5T7M4 302 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 HACD4Q5VWC8 232 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 PRAMEF13Q5VWM6 474 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 CPZQ66K79 652 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 OR2T33Q8NG76 320 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 CXorf40BQ96DE9 158 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 YIPF4Q9BSR8 244 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 CDADC1Q9BWV3 514 aa16.96■□□□□ 0.3
SMPD4-202ENST00000409031 PIRO00625 290 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 FMO6PO60774 539 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 PROS1P07225 676 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 CD6P30203 668 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 OR1D2P34982 312 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms