RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 KCND3Q9UK17 655 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 HCN2Q9UL51 889 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.01■□□□□ 0.15
NUP50-203ENST00000407019 OR1F1O43749 312 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 PDE9AO76083 593 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 LIPAP38571 399 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 FRKP42685 505 aaPredicted RBP16.01■□□□□ 0.15
NUP50-203ENST00000407019 PSMD7P51665 324 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 NUDT6P53370 316 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 PCBP4P57723 403 aaKnown RBP16.01■□□□□ 0.15
NUP50-203ENST00000407019 TAS2R38P59533 333 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 SYT16Q17RD7 645 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 TBC1D25Q3MII6 688 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 EXOSC8Q96B26 276 aaKnown RBP16.01■□□□□ 0.15
NUP50-203ENST00000407019 ZHX1-C8orf76Q96EF9 292 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 ZBED6CLQ96FA7 236 aaPredicted RBP16.01■□□□□ 0.15
NUP50-203ENST00000407019 ZNF764Q96H86 408 aaPredicted RBP16.01■□□□□ 0.15
NUP50-203ENST00000407019 TEX101Q9BY14 249 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 WDR26Q9H7D7 661 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 NMNAT1Q9HAN9 279 aaPredicted RBP16.01■□□□□ 0.15
NUP50-203ENST00000407019 SIRT3Q9NTG7 399 aaPredicted RBP16.01■□□□□ 0.15
NUP50-203ENST00000407019 GPR83Q9NYM4 423 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 C5AR2Q9P296 337 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 RHCGQ9UBD6 479 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 PMF1-BGLAPU3KQ54 211 aa16.01■□□□□ 0.15
NUP50-203ENST00000407019 GPR89AB7ZAQ6 455 aa16■□□□□ 0.15
NUP50-203ENST00000407019 M0R082 166 aa16■□□□□ 0.15
NUP50-203ENST00000407019 MID1O15344 667 aa16■□□□□ 0.15
NUP50-203ENST00000407019 TMPRSS11DO60235 418 aa16■□□□□ 0.15
NUP50-203ENST00000407019 GPR89BP0CG08 455 aa16■□□□□ 0.15
NUP50-203ENST00000407019 FUT4P22083 530 aa16■□□□□ 0.15
NUP50-203ENST00000407019 FCARP24071 287 aa16■□□□□ 0.15
NUP50-203ENST00000407019 CLK1P49759 484 aaKnown RBP16■□□□□ 0.15
NUP50-203ENST00000407019 CDC42P60953 191 aa16■□□□□ 0.15
NUP50-203ENST00000407019 PUM1Q14671 1186 aaKnown RBP eCLIP16■□□□□ 0.15
NUP50-203ENST00000407019 PTGES3Q15185 160 aaKnown RBP16■□□□□ 0.15
NUP50-203ENST00000407019 TIGD6Q17RP2 521 aa16■□□□□ 0.15
NUP50-203ENST00000407019 COLEC12Q5KU26 742 aa16■□□□□ 0.15
NUP50-203ENST00000407019 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16■□□□□ 0.15
NUP50-203ENST00000407019 C6orf120Q7Z4R8 191 aa16■□□□□ 0.15
NUP50-203ENST00000407019 BTLAQ7Z6A9 289 aa16■□□□□ 0.15
NUP50-203ENST00000407019 SLC44A2Q8IWA5 706 aaPredicted RBP16■□□□□ 0.15
NUP50-203ENST00000407019 STX19Q8N4C7 294 aa16■□□□□ 0.15
NUP50-203ENST00000407019 OR6Q1Q8NGQ2 317 aa16■□□□□ 0.15
NUP50-203ENST00000407019 APOBEC4Q8WW27 367 aaKnown RBP16■□□□□ 0.15
NUP50-203ENST00000407019 FERD3LQ96RJ6 166 aa16■□□□□ 0.15
NUP50-203ENST00000407019 SFXN1Q9H9B4 322 aa16■□□□□ 0.15
NUP50-203ENST00000407019 MBNL1Q9NR56 388 aaKnown RBP16■□□□□ 0.15
NUP50-203ENST00000407019 DNAAF2Q9NVR5 837 aaKnown RBP16■□□□□ 0.15
NUP50-203ENST00000407019 ADAM29Q9UKF5 820 aa16■□□□□ 0.15
NUP50-203ENST00000407019 ACSL5Q9ULC5 683 aa16■□□□□ 0.15
NUP50-203ENST00000407019 PNMA8BQ9ULN7 279 aaPredicted RBP16■□□□□ 0.15
NUP50-203ENST00000407019 OR1A2Q9Y585 309 aa16■□□□□ 0.15
NUP50-203ENST00000407019 MFN2O95140 757 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 KAT7O95251 611 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 GJA4P35212 333 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 CTSKP43235 329 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 LIM2P55344 173 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 GPM6BQ13491 265 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 RUNX3Q13761 415 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 KLHL17Q6TDP4 642 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 LINC01555Q8NAE3 123 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 RAB8BQ92930 207 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 C12orf66Q96MD2 445 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 COL21A1Q96P44 957 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 BTBD2Q9BX70 525 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 TEX10Q9NXF1 929 aaPredicted RBP15.99■□□□□ 0.15
NUP50-203ENST00000407019 FTSJ1Q9UET6 329 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 OSGIN1Q9UJX0 560 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 M0R129 80 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 AIREO43918 545 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 GASTP01350 101 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 STSP08842 583 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 ACP5P13686 325 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 CSNK1G2P78368 415 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 FOXD4Q12950 439 aaPredicted RBP15.99■□□□□ 0.15
NUP50-203ENST00000407019 IRF4Q15306 451 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 CST6Q15828 149 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 TANGO2Q6ICL3 276 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 VITQ6UXI7 678 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 ADCK2Q7Z695 626 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 UBE3DQ7Z6J8 389 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 MFSD4AQ8N468 514 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 GPR32P1Q8NGA4 272 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 ZNF675Q8TD23 568 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 SLIRPQ9GZT3 109 aaKnown RBP15.99■□□□□ 0.15
NUP50-203ENST00000407019 OSGEPL1Q9H4B0 414 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 DDX31Q9H8H2 851 aaKnown RBP15.99■□□□□ 0.15
NUP50-203ENST00000407019 TRPV4Q9HBA0 871 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 ACSS1Q9NUB1 689 aaPredicted RBP15.99■□□□□ 0.15
NUP50-203ENST00000407019 GDE1Q9NZC3 331 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 WDR37Q9Y2I8 494 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 STON1Q9Y6Q2 735 aa15.99■□□□□ 0.15
NUP50-203ENST00000407019 ZAR1LA6NP61 321 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 HMGN4O00479 90 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 KPNA4O00629 521 aaPredicted RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 FFAR1O14842 300 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 MPZL2O60487 215 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 B4GALT2O60909 372 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 FUCA1P04066 466 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms