RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 LRRC34Q8IZ02 419 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 FNDC5Q8NAU1 212 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 NACC2Q96BF6 587 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 CPNE5Q9HCH3 593 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 HS3ST3B1Q9Y662 390 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 TPRP12270 2363 aaKnown RBP27.57■■■□□ 2
USP42-202ENST00000404008 SRRM3A6NNA2 597 aaPredicted RBP27.57■■■□□ 2
USP42-202ENST00000404008 PCDH17O14917 1159 aa27.57■■■□□ 2
USP42-202ENST00000404008 CTNSO60931 367 aa27.57■■■□□ 2
USP42-202ENST00000404008 C8orf89P0DMQ9 161 aa27.57■■■□□ 2
USP42-202ENST00000404008 SDC1P18827 310 aa27.57■■■□□ 2
USP42-202ENST00000404008 EPHA3P29320 983 aa27.57■■■□□ 2
USP42-202ENST00000404008 SLC13A2Q13183 592 aa27.57■■■□□ 2
USP42-202ENST00000404008 ATP1A1-AS1Q5TC04 95 aa27.57■■■□□ 2
USP42-202ENST00000404008 FAAH2Q6GMR7 532 aa27.57■■■□□ 2
USP42-202ENST00000404008 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.57■■■□□ 2
USP42-202ENST00000404008 TANKQ92844 425 aa27.57■■■□□ 2
USP42-202ENST00000404008 TSLPQ969D9 159 aa27.57■■■□□ 2
USP42-202ENST00000404008 MAELQ96JY0 434 aaKnown RBP27.57■■■□□ 2
USP42-202ENST00000404008 PTCHD1Q96NR3 888 aa27.57■■■□□ 2
USP42-202ENST00000404008 MESP1Q9BRJ9 268 aa27.57■■■□□ 2
USP42-202ENST00000404008 WDR55Q9H6Y2 383 aaPredicted RBP27.57■■■□□ 2
USP42-202ENST00000404008 WDR41Q9HAD4 459 aa27.57■■■□□ 2
USP42-202ENST00000404008 NECTIN3Q9NQS3 549 aa27.57■■■□□ 2
USP42-202ENST00000404008 CLDN16Q9Y5I7 305 aa27.57■■■□□ 2
USP42-202ENST00000404008 IGKV3D-11A0A0A0MRZ8 115 aa27.56■■■□□ 2
USP42-202ENST00000404008 CDC14CA4D256 554 aa27.56■■■□□ 2
USP42-202ENST00000404008 GLOD5A6NK44 160 aa27.56■■■□□ 2
USP42-202ENST00000404008 K7ENP7 123 aa27.56■■■□□ 2
USP42-202ENST00000404008 TGDSO95455 350 aa27.56■■■□□ 2
USP42-202ENST00000404008 IL3P08700 152 aa27.56■■■□□ 2
USP42-202ENST00000404008 PRKAR1AP10644 381 aa27.56■■■□□ 2
USP42-202ENST00000404008 BCKDHAP12694 445 aa27.56■■■□□ 2
USP42-202ENST00000404008 TACR1P25103 407 aa27.56■■■□□ 2
USP42-202ENST00000404008 MAPK1P28482 360 aa27.56■■■□□ 2
USP42-202ENST00000404008 EMX2Q04743 252 aa27.56■■■□□ 2
USP42-202ENST00000404008 CDC20Q12834 499 aa27.56■■■□□ 2
USP42-202ENST00000404008 NSDHLQ15738 373 aa27.56■■■□□ 2
USP42-202ENST00000404008 SLC9B1Q4ZJI4 515 aa27.56■■■□□ 2
USP42-202ENST00000404008 INO80CQ6PI98 192 aaPredicted RBP27.56■■■□□ 2
USP42-202ENST00000404008 EPGNQ6UW88 154 aa27.56■■■□□ 2
USP42-202ENST00000404008 RIPOR1Q6ZS17 1223 aa27.56■■■□□ 2
USP42-202ENST00000404008 MMP21Q8N119 569 aa27.56■■■□□ 2
USP42-202ENST00000404008 METTL21AQ8WXB1 218 aa27.56■■■□□ 2
USP42-202ENST00000404008 UCN3Q969E3 161 aa27.56■■■□□ 2
USP42-202ENST00000404008 C1orf50Q9BV19 199 aa27.56■■■□□ 2
USP42-202ENST00000404008 MYNNQ9NPC7 610 aa27.56■■■□□ 2
USP42-202ENST00000404008 PCDHA9Q9Y5H5 950 aa27.56■■■□□ 2
USP42-202ENST00000404008 C1orf226A1L170 272 aa27.55■■■□□ 2
USP42-202ENST00000404008 TGFBR3LH3BV60 316 aa27.55■■■□□ 2
USP42-202ENST00000404008 SOCS6O14544 535 aa27.55■■■□□ 2
USP42-202ENST00000404008 PGRMC2O15173 223 aa27.55■■■□□ 2
USP42-202ENST00000404008 GYS2P54840 703 aa27.55■■■□□ 2
USP42-202ENST00000404008 ERVK-8P63133 956 aa27.55■■■□□ 2
USP42-202ENST00000404008 MAD2L1Q13257 205 aaPredicted RBP27.55■■■□□ 2
USP42-202ENST00000404008 OR52E8Q6IFG1 317 aa27.55■■■□□ 2
USP42-202ENST00000404008 LANCL3Q6ZV70 420 aa27.55■■■□□ 2
USP42-202ENST00000404008 CLNKQ7Z7G1 428 aa27.55■■■□□ 2
USP42-202ENST00000404008 MRGPREQ86SM8 312 aa27.55■■■□□ 2
USP42-202ENST00000404008 FAIM2Q9BWQ8 316 aa27.55■■■□□ 2
USP42-202ENST00000404008 HEY2Q9UBP5 337 aa27.55■■■□□ 2
USP42-202ENST00000404008 WBP11Q9Y2W2 641 aaKnown RBP27.55■■■□□ 2
USP42-202ENST00000404008 GOLGA8QA0A0J9YX86 632 aa27.54■■■□□ 2
USP42-202ENST00000404008 GOLGA8OA6NCC3 632 aa27.54■■■□□ 2
USP42-202ENST00000404008 GOLGA8NF8WBI6 632 aa27.54■■■□□ 2
USP42-202ENST00000404008 LDB3O75112 727 aa27.54■■■□□ 2
USP42-202ENST00000404008 VIMP08670 466 aaKnown RBP27.54■■■□□ 2
USP42-202ENST00000404008 LBPP18428 481 aa27.54■■■□□ 2
USP42-202ENST00000404008 VAC14Q08AM6 782 aa27.54■■■□□ 2
USP42-202ENST00000404008 IL23RQ5VWK5 629 aa27.54■■■□□ 2
USP42-202ENST00000404008 KIRREL2Q6UWL6 708 aa27.54■■■□□ 2
USP42-202ENST00000404008 IKBIPQ70UQ0 350 aa27.54■■■□□ 2
USP42-202ENST00000404008 ANKRD37Q7Z713 158 aa27.54■■■□□ 2
USP42-202ENST00000404008 TMEM132CQ8N3T6 1108 aa27.54■■■□□ 2
USP42-202ENST00000404008 CDC26Q8NHZ8 85 aa27.54■■■□□ 2
USP42-202ENST00000404008 DNAJB14Q8TBM8 379 aa27.54■■■□□ 2
USP42-202ENST00000404008 ANKRD9Q96BM1 317 aaPredicted RBP27.54■■■□□ 2
USP42-202ENST00000404008 EGLN2Q96KS0 407 aa27.54■■■□□ 2
USP42-202ENST00000404008 IP6K3Q96PC2 410 aa27.54■■■□□ 2
USP42-202ENST00000404008 ASIC5Q9NY37 505 aa27.54■■■□□ 2
USP42-202ENST00000404008 USP24Q9UPU5 2620 aa27.53■■■□□ 2
USP42-202ENST00000404008 LOC102723996A0A087X1L8 192 aa27.53■■■□□ 2
USP42-202ENST00000404008 TCRBV16S1A1N1A0A5B0 115 aa27.53■■■□□ 2
USP42-202ENST00000404008 WASHC1A8K0Z3 465 aa27.53■■■□□ 2
USP42-202ENST00000404008 FGF17O60258 216 aa27.53■■■□□ 2
USP42-202ENST00000404008 DIAPH2O60879 1101 aa27.53■■■□□ 2
USP42-202ENST00000404008 DRD2P14416 443 aa27.53■■■□□ 2
USP42-202ENST00000404008 PPP2R1BP30154 601 aa27.53■■■□□ 2
USP42-202ENST00000404008 AQP5P55064 265 aa27.53■■■□□ 2
USP42-202ENST00000404008 HEPACAMQ14CZ8 416 aa27.53■■■□□ 2
USP42-202ENST00000404008 FAM71E1Q6IPT2 247 aa27.53■■■□□ 2
USP42-202ENST00000404008 OGFOD2Q6N063 350 aa27.53■■■□□ 2
USP42-202ENST00000404008 LIX1Q8N485 282 aa27.53■■■□□ 2
USP42-202ENST00000404008 ACTRT2Q8TDY3 377 aa27.53■■■□□ 2
USP42-202ENST00000404008 THAP4Q8WY91 577 aa27.53■■■□□ 2
USP42-202ENST00000404008 C8orf44Q96CB5 159 aa27.53■■■□□ 2
USP42-202ENST00000404008 FGFR1OP2Q9NVK5 253 aa27.53■■■□□ 2
USP42-202ENST00000404008 NOP53Q9NZM5 478 aaKnown RBP27.53■■■□□ 2
USP42-202ENST00000404008 C19orf25Q9UFG5 118 aaPredicted RBP27.53■■■□□ 2
USP42-202ENST00000404008 CES1P1Q9UKY3 287 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms