RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 AP5B1Q2VPB7 878 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 TECRLQ5HYJ1 363 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 KLC3Q6P597 504 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 HSDL2Q6YN16 418 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 BNC2Q6ZN30 1099 aaPredicted RBP14.28□□□□□ -0.12
TPM1-207ENST00000403994 GOLGA7Q7Z5G4 137 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 FGD2Q7Z6J4 655 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 MRGPRGQ86SM5 289 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 TICAM1Q8IUC6 712 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 SULF2Q8IWU5 870 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 ZNF321PQ8N8H1 164 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 MORN4Q8NDC4 146 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 SLC2A12Q8TD20 617 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 ISL2Q96A47 359 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 ANKRD9Q96BM1 317 aaPredicted RBP14.28□□□□□ -0.12
TPM1-207ENST00000403994 MTERF1Q99551 399 aaKnown RBP14.28□□□□□ -0.12
TPM1-207ENST00000403994 FUT8Q9BYC5 575 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 ZNF407Q9C0G0 2248 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 OR8D2Q9GZM6 311 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 ACTR8Q9H981 624 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 LIN28AQ9H9Z2 209 aaKnown RBP14.28□□□□□ -0.12
TPM1-207ENST00000403994 CPSF2Q9P2I0 782 aaKnown RBP14.28□□□□□ -0.12
TPM1-207ENST00000403994 MYOTQ9UBF9 498 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 MTRF1LQ9UGC7 380 aaKnown RBP14.28□□□□□ -0.12
TPM1-207ENST00000403994 ADGRE2Q9UHX3 823 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 DMGDHQ9UI17 866 aaKnown RBP14.28□□□□□ -0.12
TPM1-207ENST00000403994 YARS2Q9Y2Z4 477 aaKnown RBP14.28□□□□□ -0.12
TPM1-207ENST00000403994 TSC22D4Q9Y3Q8 395 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 ANGPTL3Q9Y5C1 460 aa14.28□□□□□ -0.12
TPM1-207ENST00000403994 A8MVJ9 347 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 H0YIV9 168 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 WWP2O00308 870 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.13
TPM1-207ENST00000403994 PEX1O43933 1283 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 UGDHO60701 494 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 OR6B1O95007 311 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 SIX3O95343 332 aaPredicted RBP14.27□□□□□ -0.13
TPM1-207ENST00000403994 TUBB4AP04350 444 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 ABOP16442 354 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 CPN2P22792 545 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 ECHS1P30084 290 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 SOX3P41225 446 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 MAGEA12P43365 314 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 HK2P52789 917 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 TNFRSF17Q02223 184 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 GTF2H2Q13888 395 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 PCBP2Q15366 365 aaKnown RBP eCLIP14.27□□□□□ -0.132e-12■■■■□ 19.4
TPM1-207ENST00000403994 DEPDC1Q5TB30 811 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 LIPJQ5W064 366 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 OR4C11Q6IEV9 310 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 GTF2H2CQ6P1K8 395 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 CEP128Q6ZU80 1094 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 GPALPP1Q8IXQ4 340 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 MMGT1Q8N4V1 131 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 ZFP62Q8NB50 900 aaPredicted RBP14.27□□□□□ -0.13
TPM1-207ENST00000403994 PSD4Q8NDX1 1056 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 SLC44A1Q8WWI5 657 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 ASB15Q8WXK1 588 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 RASL10BQ96S79 203 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 PAFAH2Q99487 392 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 FMO2Q99518 471 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 CENPKQ9BS16 269 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 ZNF717Q9BY31 904 aaPredicted RBP14.27□□□□□ -0.13
TPM1-207ENST00000403994 VPS11Q9H270 941 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 DEPPQ9NTK1 212 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 HPF1Q9NWY4 346 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 ERVK-11Q9UQG0 969 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 MEMO1Q9Y316 297 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 PCDHGA11Q9Y5H2 935 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 EML6Q6ZMW3 1958 aa14.27□□□□□ -0.13
TPM1-207ENST00000403994 AKAP9Q99996 3911 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 POLQO75417 2590 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 A0A0G2JMM0 328 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 A0A1W2PPB8 328 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 A0A1W2PRS3 328 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 KIR3DP1A8MWS1 328 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 KLRC4-KLRK1H3BQV0 150 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 PRKRAO75569 313 aaKnown RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 ETHE1O95571 254 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 INHBAP08476 426 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 ESRRAP11474 423 aaPredicted RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 PIK3CGP48736 1102 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 HNRNPH2P55795 449 aaKnown RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 RPS13P62277 151 aaKnown RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 PHEXP78562 749 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 SLAMF1Q13291 335 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 CMPK2Q5EBM0 449 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 METTL2BQ6P1Q9 378 aaKnown RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 NCCRP1Q6ZVX7 275 aaPredicted RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 LURAP1LQ8IV03 231 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 PLD6Q8N2A8 252 aaKnown RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 ZCCHC7Q8N3Z6 543 aaKnown RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 OR8K3Q8NH51 312 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 AGAP11Q8TF27 550 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 RGMAQ96B86 450 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 REPS1Q96D71 796 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 IPPKQ9H8X2 491 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 TIMMDC1Q9NPL8 285 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 ZNF358Q9NW07 568 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 COPS7AQ9UBW8 275 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms