RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 NAF1Q96HR8 494 aaKnown RBP31.33■■■□□ 2.61
CSNK1E-204ENST00000403904 C5AR2Q9P296 337 aa31.33■■■□□ 2.61
CSNK1E-204ENST00000403904 MKL2Q9ULH7 1088 aa31.33■■■□□ 2.61
CSNK1E-204ENST00000403904 FARSAQ9Y285 508 aaKnown RBP31.33■■■□□ 2.61
CSNK1E-204ENST00000403904 C1orf226A1L170 272 aa31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 TERTO14746 1132 aaKnown RBP31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 TLX3O43711 291 aaPredicted RBP31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 KLF7O75840 302 aaPredicted RBP31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 IDO1P14902 403 aa31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 NCF2P19878 526 aaPredicted RBP31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 RPS15P62841 145 aaKnown RBP31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 BTG2P78543 158 aa31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 ZNF595Q8IYB9 648 aa31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 KRTCAP2Q8N6L1 136 aa31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 CCDC86Q9H6F5 360 aaKnown RBP31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 NXT1Q9UKK6 140 aaKnown RBP31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 PTRH2Q9Y3E5 179 aaKnown RBP31.32■■■□□ 2.6
CSNK1E-204ENST00000403904 C21orf140B9A014 251 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 DRD2P14416 443 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 EFNA3P52797 238 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 RPS18P62269 152 aaKnown RBP31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 RPS6KA2Q15349 733 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 GSTA3Q16772 222 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 MED25Q71SY5 747 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 NUDT8Q8WV74 236 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 BRINP2Q9C0B6 783 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 ACTL8Q9H568 366 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 TRIM33Q9UPN9 1127 aa31.31■■■□□ 2.6
CSNK1E-204ENST00000403904 CLDN4O14493 209 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 LDB3O75112 727 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 CLN3Q13286 438 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 GPR87Q9BY21 358 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 VN1R1Q9GZP7 353 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 PRTFDC1Q9NRG1 225 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 PADI2Q9Y2J8 665 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 ZFHX4Q86UP3 3567 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 ANKRD28O15084 1053 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 PRMT3O60678 531 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 CD63P08962 238 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 DDCP20711 480 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 CLDN8P56748 225 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 SLC13A2Q13183 592 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 METTL21CQ5VZV1 264 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 OR4N5Q8IXE1 308 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 OR2Y1Q8NGV0 311 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 DNAJB14Q8TBM8 379 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 TMEM121BQ9BXQ6 578 aaPredicted RBP31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 GPN2Q9H9Y4 310 aaPredicted RBP31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 MIEF1Q9NQG6 463 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 DKK4Q9UBT3 224 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 CES1P1Q9UKY3 287 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 TCFL5Q9UL49 500 aa31.3■■■□□ 2.6
CSNK1E-204ENST00000403904 IDSB3KWA1 339 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 RECKO95980 971 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 MAOAP21397 527 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 PTPN4P29074 926 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 UFM1P61960 85 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 RHAGQ02094 409 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 OR52E8Q6IFG1 317 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 SLC48A1Q6P1K1 146 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 VASH2Q86V25 355 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 TANKQ92844 425 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 TEX37Q96LM6 180 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 PTCHD1Q96NR3 888 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 CRB3Q9BUF7 120 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 DPY30Q9C005 99 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 REEP4Q9H6H4 257 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 SDR39U1Q9NRG7 319 aaPredicted RBP31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 IL17BQ9UHF5 180 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 C3orf18Q9UK00 162 aa31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 MRPS18BQ9Y676 258 aaKnown RBP31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 COPG1Q9Y678 874 aaKnown RBP31.29■■■□□ 2.6
CSNK1E-204ENST00000403904 BLACEA4D250 179 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 CTNSO60931 367 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 HEXBP07686 556 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 FURINP09958 794 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 PRPS1L1P21108 318 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 HSD17B7P56937 341 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 ID2Q02363 134 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 ANKRD26P1Q6NSI1 321 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 FAM180BQ6P0A1 224 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 TICAM1Q8IUC6 712 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 RIMKLAQ8IXN7 391 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 FAM9CQ8IZT9 166 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 KIAA1143Q96AT1 154 aaPredicted RBP31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 KCND3Q9UK17 655 aa31.28■■■□□ 2.6
CSNK1E-204ENST00000403904 FGF17O60258 216 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 UMODP07911 640 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 FOLR3P41439 243 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 FOLH1Q04609 750 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 ACTN3Q08043 901 aaPredicted RBP31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 PDCD4Q53EL6 469 aaKnown RBP31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 QSOX2Q6ZRP7 698 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 SCUBE1Q8IWY4 988 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 ZNF248Q8NDW4 579 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 SNIP1Q8TAD8 396 aaKnown RBP31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 ANKRD9Q96BM1 317 aaPredicted RBP31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 NECTIN3Q9NQS3 549 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 PRDM9Q9NQV7 894 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 UTS2RQ9UKP6 389 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms