RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.3■■□□□ 1.64
CGREF1-204ENST00000402550 GFM2Q969S9 779 aaKnown RBP25.3■■□□□ 1.64
CGREF1-204ENST00000402550 TBC1D20Q96BZ9 403 aa25.3■■□□□ 1.64
CGREF1-204ENST00000402550 OR1F2PQ96R84 312 aa25.3■■□□□ 1.64
CGREF1-204ENST00000402550 ZBTB18Q99592 522 aa25.3■■□□□ 1.64
CGREF1-204ENST00000402550 ZIM2Q9NZV7 527 aa25.3■■□□□ 1.64
CGREF1-204ENST00000402550 GPN3Q9UHW5 284 aaPredicted RBP25.3■■□□□ 1.64
CGREF1-204ENST00000402550 CCDC88CQ9P219 2028 aa25.3■■□□□ 1.64
CGREF1-204ENST00000402550 ANKRD11Q6UB99 2663 aaPredicted RBP25.3■■□□□ 1.64
CGREF1-204ENST00000402550 LAMA5O15230 3695 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 A0A1W2PR48 441 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 BLACEA4D250 179 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 C21orf140B9A014 251 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 ALBP02768 609 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 ALDH9A1P49189 494 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 CLNS1AP54105 237 aaKnown RBP25.29■■□□□ 1.64
CGREF1-204ENST00000402550 FAM71E1Q6IPT2 247 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 R3HCC1LQ7Z5L2 792 aaKnown RBP25.29■■□□□ 1.64
CGREF1-204ENST00000402550 CLNKQ7Z7G1 428 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 SHISA5Q8N114 240 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 FAM47BQ8NA70 645 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 LRRC37BQ96QE4 947 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 PRPF18Q99633 342 aaKnown RBP25.29■■□□□ 1.64
CGREF1-204ENST00000402550 GPR87Q9BY21 358 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 NMUR2Q9GZQ4 415 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 SAR1AQ9NR31 198 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 SSUH2Q9Y2M2 353 aa25.29■■□□□ 1.64
CGREF1-204ENST00000402550 RRP8O43159 456 aaKnown RBP25.28■■□□□ 1.64
CGREF1-204ENST00000402550 AKAP10O43572 662 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 SLC22A3O75751 556 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 AIFM1O95831 613 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 RAB40ALP0C0E4 278 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 DDCP20711 480 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 JAK1P23458 1154 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 MRPL19P49406 292 aaKnown RBP25.28■■□□□ 1.64
CGREF1-204ENST00000402550 NCF4Q15080 339 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 RIPOR1Q6ZS17 1223 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 VASH2Q86V25 355 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 CPSF7Q8N684 471 aaKnown RBP25.28■■□□□ 1.64
CGREF1-204ENST00000402550 FKBP10Q96AY3 582 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 FAM117AQ9C073 453 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 SLC26A1Q9H2B4 701 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 REEP4Q9H6H4 257 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 RPF2Q9H7B2 306 aaKnown RBP25.28■■□□□ 1.64
CGREF1-204ENST00000402550 GPN2Q9H9Y4 310 aaPredicted RBP25.28■■□□□ 1.64
CGREF1-204ENST00000402550 FARSAQ9Y285 508 aaKnown RBP25.28■■□□□ 1.64
CGREF1-204ENST00000402550 CFAP47Q6ZTR5 3102 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 NUP210LQ5VU65 1888 aa25.28■■□□□ 1.64
CGREF1-204ENST00000402550 CLDN4O14493 209 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 FCHO1O14526 889 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 CNOT3O75175 753 aaKnown RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 FHP07954 510 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 UFM1P61960 85 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 RPS15P62841 145 aaKnown RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 DNASE1L3Q13609 305 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 C18orf63Q68DL7 685 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 GLB1L3Q8NCI6 653 aaPredicted RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 KIAA1143Q96AT1 154 aaPredicted RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 DCBLD2Q96PD2 775 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 CSF3RQ99062 836 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 PRDM9Q9NQV7 894 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 CTSFQ9UBX1 484 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 IL17BQ9UHF5 180 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 KCND3Q9UK17 655 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 PSME2Q9UL46 239 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 PCDHA9Q9Y5H5 950 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 IGLV3-12A0A075B6K2 115 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 CYR61O00622 381 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 KLF7O75840 302 aaPredicted RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 LIFP15018 202 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 ADSLP30566 484 aaPredicted RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 ACTN3Q08043 901 aaPredicted RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 SRSF6Q13247 344 aaKnown RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 NKG7Q16617 165 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 OR52E8Q6IFG1 317 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 SPACA3Q8IXA5 215 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 KRTCAP2Q8N6L1 136 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 ENDOVQ8N8Q3 282 aaKnown RBP25.27■■□□□ 1.64
CGREF1-204ENST00000402550 MTERF3Q96E29 417 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 RBCK1Q9BYM8 510 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 ZNF385DQ9H6B1 395 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 C14orf105Q9NVL8 296 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 TMEM45AQ9NWC5 275 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 EHD3Q9NZN3 535 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 PCDHGA6Q9Y5G7 932 aa25.27■■□□□ 1.64
CGREF1-204ENST00000402550 ANKRD28O15084 1053 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 SCAMP2O15127 329 aaKnown RBP25.26■■□□□ 1.63
CGREF1-204ENST00000402550 CD63P08962 238 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 COX7A2P14406 83 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 C21orf58P58505 322 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 MC1RQ01726 317 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 UBAP2LQ14157 1087 aaKnown RBP25.26■■□□□ 1.63
CGREF1-204ENST00000402550 DPY19L1Q2PZI1 675 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 VWA2Q5GFL6 755 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 MFSD4BQ5TF39 518 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 PAOXQ6QHF9 649 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 ZNF595Q8IYB9 648 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 STT3BQ8TCJ2 826 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 TANKQ92844 425 aa25.26■■□□□ 1.63
CGREF1-204ENST00000402550 TGIF2Q9GZN2 237 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms