RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 B4GALT2O60909 372 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 DNAJB6O75190 326 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 C9P02748 559 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 CTSBP07858 339 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 GNSP15586 552 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 ZNF26P17031 533 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-205ENST00000401607 RXRGP48443 463 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 CHRNB3Q05901 458 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 RUNX2Q13950 521 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 ATP6AP1Q15904 470 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 PLK5Q496M5 336 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 FAM92BQ6ZTR7 304 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 ICA1LQ8NDH6 482 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 CNRIP1Q96F85 164 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-205ENST00000401607 PILRBQ9UKJ0 227 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 FAF1Q9UNN5 650 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-205ENST00000401607 MAP4K5Q9Y4K4 846 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 AK5Q9Y6K8 562 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 RHPN2P1A8MT19 583 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 KIF1CO43896 1103 aaKnown RBP24.23■■□□□ 1.47
CPNE1-205ENST00000401607 RPSAP08865 295 aaKnown RBP24.23■■□□□ 1.47
CPNE1-205ENST00000401607 NR2F6P10588 404 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 KDELR2P33947 212 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 PCGF2P35227 344 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 CCT8P50990 548 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 EPHA4P54764 986 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 GFERP55789 205 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 DUSP2Q05923 314 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 VAC14Q08AM6 782 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 COL9A2Q14055 689 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-205ENST00000401607 LRRC23Q53EV4 343 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-205ENST00000401607 C11orf74Q86VG3 221 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 SUN3Q8TAQ9 357 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 NEURL3Q96EH8 262 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 SLC47A1Q96FL8 570 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 CENPNQ96H22 339 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-205ENST00000401607 RAD21L1Q9H4I0 556 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 COQ10BQ9H8M1 238 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 LRIT1Q9P2V4 623 aa24.23■■□□□ 1.47
CPNE1-205ENST00000401607 A0A1W2PS29 197 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 B3GALT2O43825 422 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 ERAL1O75616 437 aaKnown RBP24.22■■□□□ 1.47
CPNE1-205ENST00000401607 NTSP30990 170 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 LIM2P55344 173 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 TNFRSF17Q02223 184 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 ZNF750Q32MQ0 723 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 GCNT6Q5T4J0 391 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 TLDC1Q6P9B6 456 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 PRSS41Q7RTY9 318 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 GALNT10Q86SR1 603 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 SLC35F3Q8IY50 421 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 EID3Q8N140 333 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 DNAJC22Q8N4W6 341 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 ARL10Q8N8L6 244 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 C11orf65Q8NCR3 313 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 C10orf90Q96M02 699 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 CIB1Q99828 191 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 CCDC3Q9BQI4 270 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 ASPSCR1Q9BZE9 553 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 STARD5Q9NSY2 213 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 PHF11Q9UIL8 331 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 CNOT11Q9UKZ1 510 aaKnown RBP24.22■■□□□ 1.47
CPNE1-205ENST00000401607 DAPP1Q9UN19 280 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 LRCH1Q9Y2L9 728 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 SCN3AQ9NY46 2000 aa24.22■■□□□ 1.47
CPNE1-205ENST00000401607 HRO43593 1189 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 CKMT2P17540 419 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 NCBP2P52298 156 aaKnown RBP eCLIP24.21■■□□□ 1.479e-8■□□□□ 9.8
CPNE1-205ENST00000401607 EPHX4Q8IUS5 362 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 MCATQ8IVS2 390 aaKnown RBP24.21■■□□□ 1.47
CPNE1-205ENST00000401607 ARHGEF39Q8N4T4 335 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 BBS4Q96RK4 519 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 RAB33BQ9H082 229 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 TMEM38AQ9H6F2 299 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 MAGIXQ9H6Y5 334 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 ZNF860A6NHJ4 632 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 ZNF10P21506 573 aaPredicted RBP24.21■■□□□ 1.47
CPNE1-205ENST00000401607 OLR1P78380 273 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 CEBPEQ15744 281 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 NKAIN2Q5VXU1 208 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 GALNT4Q8N4A0 578 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 POP5Q969H6 163 aaKnown RBP24.21■■□□□ 1.47
CPNE1-205ENST00000401607 PYURFQ96I23 114 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 TGM7Q96PF1 710 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 CSF3RQ99062 836 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 SLC29A1Q99808 456 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 SAMD4AQ9UPU9 718 aaKnown RBP24.21■■□□□ 1.47
CPNE1-205ENST00000401607 ENTPD4Q9Y227 616 aa24.21■■□□□ 1.47
CPNE1-205ENST00000401607 VCANP13611 3396 aa24.2■■□□□ 1.47
CPNE1-205ENST00000401607 SAC3D1A6NKF1 404 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 GCM2O75603 506 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-205ENST00000401607 LDLRP01130 860 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 C8orf89P0DMQ9 161 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 CPN2P22792 545 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 ALDH4A1P30038 563 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 BUD31P41223 144 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-205ENST00000401607 ARRB1P49407 418 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-205ENST00000401607 CRYBA2P53672 197 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 EEF1A2Q05639 463 aaKnown RBP24.2■■□□□ 1.46
CPNE1-205ENST00000401607 RBBP4Q09028 425 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms