RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 FRMD6Q96NE9 622 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 MRPL57Q9BQC6 102 aaKnown RBP14.76□□□□□ -0.05
ATG4B-203ENST00000400772 RHOXF2Q9BQY4 288 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 NTMT1Q9BV86 223 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 EPB41L4BQ9H329 900 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 SEC14L3Q9UDX4 400 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 TMCO1Q9UM00 188 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 ATG4BQ9Y4P1 393 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 ASB4Q9Y574 426 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 CLCA3PQ9Y6N3 262 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 A0A0A6YYD5 115 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 A0A1B0GTL3 188 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 EXOC1LA0A1B0GW35 172 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 SYNDIG1LA6NDD5 238 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 C17orf105B2RV13 164 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 FOXE1O00358 373 aaPredicted RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 PPP6CO00743 305 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 TMPRSS11DO60235 418 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 FGF17O60258 216 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 SMIM24O75264 130 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 EEDO75530 441 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 PRKRAO75569 313 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 ZFAND5O76080 213 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 CLDN9O95484 217 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 RAP1GDS1P52306 607 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 HNRNPH2P55795 449 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 IGLV3-21P80748 117 aaPredicted RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 TRAF3Q13114 568 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 CUL3Q13618 768 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 RNFT1Q5M7Z0 435 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 MRM1Q6IN84 353 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 GPR180Q86V85 440 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 FJX1Q86VR8 437 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 SIAH3Q8IW03 269 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 MORN4Q8NDC4 146 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 OR14A16Q8NHC5 309 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 DAZLQ92904 295 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 REPS1Q96D71 796 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 MTFMTQ96DP5 389 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 GPR137Q96N19 417 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 MRPL46Q9H2W6 279 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 RPF2Q9H7B2 306 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 DDX31Q9H8H2 851 aaKnown RBP14.75□□□□□ -0.05
ATG4B-203ENST00000400772 SPACA6W5XKT8 324 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 CROCCQ5TZA2 2017 aa14.75□□□□□ -0.05
ATG4B-203ENST00000400772 DIDO1Q9BTC0 2240 aaKnown RBP14.74□□□□□ -0.05
ATG4B-203ENST00000400772 A0A1B0GUH1 482 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 WASHC1A8K0Z3 465 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 PROM1O43490 865 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 RPS17P08708 135 aaKnown RBP14.74□□□□□ -0.05
ATG4B-203ENST00000400772 TNNI3P19429 210 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 COL8A1P27658 744 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 CCNG1P51959 295 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 PHEXP78562 749 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 TNFRSF17Q02223 184 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 ALDH6A1Q02252 535 aaKnown RBP14.74□□□□□ -0.05
ATG4B-203ENST00000400772 FAM219BQ5XKK7 198 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 DGAT2L6Q6ZPD8 337 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 MAMDC2Q7Z304 686 aaPredicted RBP14.74□□□□□ -0.05
ATG4B-203ENST00000400772 MDGA2Q7Z553 956 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 SULF2Q8IWU5 870 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 CPSF7Q8N684 471 aaKnown RBP14.74□□□□□ -0.05
ATG4B-203ENST00000400772 SLC2A12Q8TD20 617 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 ZNF721Q8TF20 911 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 UCN3Q969E3 161 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 ATP6V1E2Q96A05 226 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 CCDC77Q9BR77 488 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 CENPKQ9BS16 269 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 C1QTNF3Q9BXJ4 246 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 OR8D2Q9GZM6 311 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 TSPAN10Q9H1Z9 355 aaPredicted RBP14.74□□□□□ -0.05
ATG4B-203ENST00000400772 SEMA4BQ9NPR2 832 aaPredicted RBP14.74□□□□□ -0.05
ATG4B-203ENST00000400772 MS4A12Q9NXJ0 267 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 MYOTQ9UBF9 498 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 PPT2Q9UMR5 302 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 YARS2Q9Y2Z4 477 aaKnown RBP14.74□□□□□ -0.05
ATG4B-203ENST00000400772 DOPEY1Q5JWR5 2465 aa14.74□□□□□ -0.05
ATG4B-203ENST00000400772 UTP20O75691 2785 aaKnown RBP14.73□□□□□ -0.05
ATG4B-203ENST00000400772 A0A1W2PR48 441 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 A8MT66 165 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 NPIPA5E9PKD4 350 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 ZG16O60844 167 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 OR2J2O76002 312 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 STT3AP46977 705 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 CDH13P55290 713 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 FOLH1Q04609 750 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 SLC29A2Q14542 456 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 KRTCAP3Q53RY4 240 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 LGSNQ5TDP6 509 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 MYO7BQ6PIF6 2116 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 HSDL2Q6YN16 418 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 GSPT2Q8IYD1 628 aaKnown RBP14.73□□□□□ -0.05
ATG4B-203ENST00000400772 TMEM156Q8N614 296 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 ZNF483Q8TF39 744 aaPredicted RBP14.73□□□□□ -0.05
ATG4B-203ENST00000400772 SREK1Q8WXA9 508 aaKnown RBP14.73□□□□□ -0.05
ATG4B-203ENST00000400772 TANKQ92844 425 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 PPWD1Q96BP3 646 aaKnown RBP14.73□□□□□ -0.05
ATG4B-203ENST00000400772 TRIM44Q96DX7 344 aaPredicted RBP14.73□□□□□ -0.05
ATG4B-203ENST00000400772 MTBPQ96DY7 904 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 TMEM216Q9P0N5 145 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms