RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TMEM80Q96HE8 168 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 OR2M4Q96R27 311 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ITPAQ9BY32 194 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.22□□□□□ -0.29
VAPA-202ENST00000400000 CPEB1Q9BZB8 566 aaKnown RBP13.22□□□□□ -0.29
VAPA-202ENST00000400000 PSAT1Q9Y617 370 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 PIAS3Q9Y6X2 628 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ACADVLP49748 655 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 E2F1Q01094 437 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 CDNFQ49AH0 187 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 SLC30A8Q8IWU4 369 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 ELMOD2Q8IZ81 293 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 OR2S2Q9NQN1 319 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 DNMT3AQ9Y6K1 912 aaPredicted RBP13.21□□□□□ -0.29
VAPA-202ENST00000400000 H6PDO95479 791 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 CD79AP11912 226 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 ANXA8P13928 327 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 LSSP48449 732 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 SLC25A11Q02978 314 aaKnown RBP13.21□□□□□ -0.29
VAPA-202ENST00000400000 CRYZQ08257 329 aaKnown RBP13.21□□□□□ -0.29
VAPA-202ENST00000400000 C9orf135Q5VTT2 229 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 ZDHHC24Q6UX98 284 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 CARM1Q86X55 608 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 OR14L1PQ8NHC6 308 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 GNPDA2Q8TDQ7 276 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 PIP5K1AQ99755 562 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 FANCFQ9NPI8 374 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 ADAP00813 363 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 AK4P27144 223 aaPredicted RBP13.21□□□□□ -0.29
VAPA-202ENST00000400000 ETV5P41161 510 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 RAB28P51157 221 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 SHC2P98077 582 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 EEF1A1P5Q5VTE0 462 aa13.21□□□□□ -0.29
VAPA-202ENST00000400000 ISPDA4D126 451 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 F10P00742 488 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 ATF6P18850 670 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 OXTRP30559 389 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 SLC6A6P31641 620 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 SLC6A4P31645 630 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 MAP4K2Q12851 820 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 FAM86B1Q8N7N1 296 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 OR56A1Q8NGH5 318 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 SEC14L1Q92503 715 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 SFXN1Q9H9B4 322 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.21□□□□□ -0.3
VAPA-202ENST00000400000 TEX13CA0A0J9YWL9 993 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 GGT3PA6NGU5 568 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 FZD9O00144 591 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 CAPN5O15484 640 aaPredicted RBP13.21□□□□□ -0.3
VAPA-202ENST00000400000 DUX1O43812 170 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 RPS26P11Q5JNZ5 115 aaPredicted RBP13.21□□□□□ -0.3
VAPA-202ENST00000400000 UBE2Q1Q7Z7E8 422 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 TSPAN33Q86UF1 283 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 LIX1LQ8IVB5 337 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 SLC35F5Q8WV83 523 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 FCRL3Q96P31 734 aaPredicted RBP13.21□□□□□ -0.3
VAPA-202ENST00000400000 NXF5Q9H1B4 397 aaKnown RBP13.21□□□□□ -0.3
VAPA-202ENST00000400000 CLEC4EQ9ULY5 219 aa13.21□□□□□ -0.3
VAPA-202ENST00000400000 FARS2O95363 451 aaKnown RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 PRKCAP17252 672 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 ZNF84P51523 738 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 IST1P53990 364 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 GPX6P59796 221 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 PTGR1Q14914 329 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 MFSD13AQ14CX5 517 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 NSDHLQ15738 373 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 TMEM151AQ8N4L1 468 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 OR51L1Q8NGJ5 315 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.2□□□□□ -0.32e-18■■■■□ 19.9
VAPA-202ENST00000400000 S100A16Q96FQ6 103 aaKnown RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 PSKH2Q96QS6 385 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 DPAGT1Q9H3H5 408 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 PDE7BQ9NP56 450 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 EPHA6Q9UF33 1036 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 SLCO3A1Q9UIG8 710 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 TMEM11P17152 192 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 CLDN2P57739 230 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 TBPL1P62380 186 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 SIM1P81133 766 aaPredicted RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 GRB7Q14451 532 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 CREB3L4Q8TEY5 395 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 C12orf43Q96C57 262 aaKnown RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 KCNN3Q9UGI6 736 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 ICKQ9UPZ9 632 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 FOXD2O60548 495 aaPredicted RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 WDR4P57081 412 aaKnown RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 SLC36A4Q6YBV0 504 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 NRROSQ86YC3 692 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 CSNK1A1LQ8N752 337 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 ZDHHC1Q8WTX9 485 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 RLN3Q8WXF3 142 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 DPH7Q9BTV6 452 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 OSBPL7Q9BZF2 842 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 ENAMQ9NRM1 1142 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 ST14Q9Y5Y6 855 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 IQCF3P0C7M6 154 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms