RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CDK15Q96Q40 435 aa7.07□□□□□ -1.28
USP16-204ENST00000399976 MTERF1Q99551 399 aaKnown RBP7.07□□□□□ -1.28
USP16-204ENST00000399976 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.07□□□□□ -1.28
USP16-204ENST00000399976 C3orf18Q9UK00 162 aa7.07□□□□□ -1.28
USP16-204ENST00000399976 CFL2Q9Y281 166 aa7.07□□□□□ -1.28
USP16-204ENST00000399976 RAXQ9Y2V3 346 aa7.07□□□□□ -1.28
USP16-204ENST00000399976 PTRH2Q9Y3E5 179 aaKnown RBP7.07□□□□□ -1.28
USP16-204ENST00000399976 MYO1GB0I1T2 1018 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 SGK494L7N484 410 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 CSNK2A2P19784 350 aaPredicted RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 ALAS2P22557 587 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 CPN2P22792 545 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 F8A1P23610 371 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 TRHRP34981 398 aaPredicted RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 HTR6P50406 440 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 GPR143P51810 404 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 FOXA1P55317 472 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 HNRNPH2P55795 449 aaKnown RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 PLIN5Q00G26 463 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 BTKQ06187 659 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 IL10RAQ13651 578 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 CCNYL2Q5T2Q4 361 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 BORAQ6PGQ7 559 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 FOXR1Q6PIV2 292 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 EPGNQ6UW88 154 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 TMEM64Q6YI46 380 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 MARCH9Q86YJ5 346 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 RIMKLAQ8IXN7 391 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 DNAJB8Q8NHS0 232 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 ELP5Q8TE02 316 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 C16orf78Q8WTQ4 265 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 DAZLQ92904 295 aaKnown RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 ANKRD9Q96BM1 317 aaPredicted RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 CTHRC1Q96CG8 243 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 COQ8BQ96D53 544 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 WDR77Q9BQA1 342 aaPredicted RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 BHLHE41Q9C0J9 482 aaPredicted RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 OR51B5Q9H339 312 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 RPF2Q9H7B2 306 aaKnown RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 ZIM2Q9NZV7 527 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 CTSFQ9UBX1 484 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 EIF3LQ9Y262 564 aaKnown RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 CCDC88CQ9P219 2028 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 PIP5K1BO14986 540 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 TMPRSS11DO60235 418 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 OR1D4P47884 311 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 CLDN8P56748 225 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 DCAF7P61962 342 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 CRB2Q5IJ48 1285 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 EXOSC6Q5RKV6 272 aaKnown RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 C6orf136Q5SQH8 315 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 VWA5B1Q5TIE3 1220 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 ZCCHC12Q6PEW1 402 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 PRSS41Q7RTY9 318 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 C1orf52Q8N6N3 182 aaKnown RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 ZNF781Q8N8C0 355 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 OR11G2Q8NGC1 345 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 OR8J2Q8NGG1 315 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 ZCCHC10Q8TBK6 192 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 APOBEC4Q8WW27 367 aaKnown RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 TP53INP1Q96A56 240 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 ZNF681Q96N22 645 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 TNFRSF12AQ9NP84 129 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 STARD5Q9NSY2 213 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 ATAD3AQ9NVI7 634 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 G3BP2Q9UN86 482 aaKnown RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 KCNMB2Q9Y691 235 aa7.06□□□□□ -1.28
USP16-204ENST00000399976 PTPRZ1P23471 2315 aaPredicted RBP7.06□□□□□ -1.28
USP16-204ENST00000399976 SDHDO14521 159 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ATXN7O15265 892 aaPredicted RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 ITM2AO43736 263 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 DYRK3O43781 588 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 PSMG1O95456 288 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 AIFM1O95831 613 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 LBPP18428 481 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 HPCAL1P37235 193 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 CYP4F2P78329 520 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 FUT7Q11130 342 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 RPUSD3Q6P087 351 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 KIRREL2Q6UWL6 708 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ATG14Q6ZNE5 492 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 OR2T11Q8NH01 316 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ZFP28Q8NHY6 868 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 SFXN5Q8TD22 340 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 NTNG2Q96CW9 530 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 VMP1Q96GC9 406 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 FBXL20Q96IG2 436 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 MAPKAP1Q9BPZ7 522 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 C20orf27Q9GZN8 174 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 C12orf65Q9H3J6 166 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 REEP4Q9H6H4 257 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ATP13A2Q9NQ11 1180 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 AIG1Q9NVV5 245 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ZNF451Q9Y4E5 1061 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 SPTBN4Q9H254 2564 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 A0A1W2PR48 441 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 EEDO75530 441 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 IGKV3-11P04433 115 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 FURINP09958 794 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 COX7A2P14406 83 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms