RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PRTFDC1Q9NRG1 225 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 PRODH2Q9UF12 536 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 HS3ST2Q9Y278 367 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 MAN2B1O00754 1011 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 GJB3O75712 270 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 CLPXO76031 633 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 MOGQ16653 247 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZFP69Q49AA0 526 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 LRRC25Q8N386 305 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 MINDY2Q8NBR6 621 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 NKX2-4Q9H2Z4 354 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPN1Q9HCN4 374 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 FAM118AQ9NWS6 357 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF221Q9UK13 617 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 SDC1P18827 310 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 AOAHP28039 575 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 SLC6A6P31641 620 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMBIM6P55061 237 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ST3GAL4Q11206 333 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 CBX3Q13185 183 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 SLC27A4Q6P1M0 643 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 KLHDC8AQ8IYD2 350 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF676Q8N7Q3 588 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 RREB1Q92766 1687 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 CDKL1Q00532 357 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 NDUFA5Q16718 116 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF404Q494X3 552 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 CTSL3PQ5NE16 218 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF550Q7Z398 422 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 NANOGNBQ7Z5D8 188 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMIEQ8NEW7 156 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR8K5Q8NH50 307 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 CNIH3Q8TBE1 160 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 MMABQ96EY8 250 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZDHHC12Q96GR4 267 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPR174Q9BXC1 333 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR8D2Q9GZM6 311 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 FZD3Q9NPG1 666 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 SAGE1Q9NXZ1 904 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 HCFC2Q9Y5Z7 792 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 PRSS21Q9Y6M0 314 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 CNTRLQ7Z7A1 2325 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 A8MU76 341 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPR37L1O60883 481 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 CD72P21854 359 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 GMFBP60983 142 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 C1orf61Q13536 156 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 DSG2Q14126 1118 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 TCEAL5Q5H9L2 206 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 TUBA3EQ6PEY2 450 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZSWIM9Q86XI8 627 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR5AR1Q8NGP9 310 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 FGF13Q92913 245 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 TAMM41Q96BW9 452 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 TRIM2Q9C040 744 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 EURLQ9NYK6 297 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 SEC14L4Q9UDX3 406 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 HSPE1-MOB4S4R3N1 261 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 MYOCOSA0A1B0GUC4 107 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 APBB3O95704 486 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 RNH1P13489 461 aaKnown RBP13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 TCEA1P23193 301 aaKnown RBP13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 GNALP38405 381 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 BCAP31P51572 246 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 FLYWCH1Q4VC44 716 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 GHDCQ8N2G8 530 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR8J1Q8NGP2 316 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ASB11Q8WXH4 323 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ISOC1Q96CN7 298 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 GINS4Q9BRT9 223 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 PLEKHA1Q9HB21 404 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 VAPAQ9P0L0 249 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ABI3Q9P2A4 366 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 MKL2Q9ULH7 1088 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF451Q9Y4E5 1061 aa13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 DNMT3AQ9Y6K1 912 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA11-201ENST00000398587 ARL6IP5O75915 188 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 CTSCP53634 463 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF829Q3KNS6 432 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 IER5LQ5T953 404 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 MLIPQ5VWP3 458 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 XKR5Q6UX68 686 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF551Q7Z340 670 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 VTCN1Q7Z7D3 282 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 CSNK1A1LQ8N752 337 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 PROKR2Q8NFJ6 384 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 JPH3Q8WXH2 748 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 EZH1Q92800 747 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 SLC22A12Q96S37 553 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 IL21RQ9HBE5 538 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 SLC35C2Q9NQQ7 365 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 BTNL2Q9UIR0 455 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ORC5O43913 435 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ITGA10O75578 1167 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 SORBS2O94875 1100 aaKnown RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 TAS2R38P59533 333 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 RPS26P62854 115 aaKnown RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 TXNL4AP83876 142 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms