RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CCT6BQ92526 530 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 ANKRD9Q96BM1 317 aaPredicted RBP11.13□□□□□ -0.63
TFF3-202ENST00000398431 F2RL3Q96RI0 385 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 TMEM79Q9BSE2 394 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 CNPPD1Q9BV87 410 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 OR8D2Q9GZM6 311 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 SH2D2AQ9NP31 389 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 ZNF358Q9NW07 568 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 TUBA8Q9NY65 449 aaPredicted RBP11.13□□□□□ -0.63
TFF3-202ENST00000398431 GPRC5BQ9NZH0 403 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 CTNNAL1Q9UBT7 734 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 CLCA3PQ9Y6N3 262 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 NINQ8N4C6 2090 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 NCKAP5O14513 1909 aa11.13□□□□□ -0.63
TFF3-202ENST00000398431 NAV3Q8IVL0 2385 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 FAM221AA4D161 298 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 ANKDD1BA6NHY2 528 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 ACOT7O00154 380 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 AQP7O14520 342 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 SUSD5O60279 629 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 LDB3O75112 727 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 CTAG2O75638 210 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 CD99P14209 185 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
TFF3-202ENST00000398431 EPORP19235 508 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 ENDOUP21128 410 aaKnown RBP11.12□□□□□ -0.63
TFF3-202ENST00000398431 MGAT5Q09328 741 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 MYBPHQ13203 477 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 SNTB1Q13884 538 aaKnown RBP11.12□□□□□ -0.63
TFF3-202ENST00000398431 DOC2AQ14183 400 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 MORF4L2Q15014 288 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 EFTUD2Q15029 972 aaKnown RBP eCLIP11.12□□□□□ -0.63
TFF3-202ENST00000398431 TGFBIQ15582 683 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 FBXO48Q5FWF7 155 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 PIGGQ5H8A4 983 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 TRIM40Q6P9F5 258 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 LYPD8Q6UX82 237 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 B3GNT6Q6ZMB0 384 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 HDXQ7Z353 690 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 ANKMY2Q8IV38 441 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 CLYBLQ8N0X4 340 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 PDIK1LQ8N165 341 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 SPATA6LQ8N4H0 392 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 GOLM1Q8NBJ4 401 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 OR14A16Q8NHC5 309 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 SLC2A12Q8TD20 617 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 DAZLQ92904 295 aaKnown RBP11.12□□□□□ -0.63
TFF3-202ENST00000398431 LRRC39Q96DD0 335 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 WDR34Q96EX3 536 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 SGCZQ96LD1 299 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 MAPKAP1Q9BPZ7 522 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 CAPS2Q9BXY5 557 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 PARD6BQ9BYG5 372 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 PITHD1Q9GZP4 211 aaPredicted RBP11.12□□□□□ -0.63
TFF3-202ENST00000398431 EHD1Q9H4M9 534 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 PROK2Q9HC23 129 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 SMYD2Q9NRG4 433 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 MRPS33Q9Y291 106 aaKnown RBP11.12□□□□□ -0.63
TFF3-202ENST00000398431 ATG4BQ9Y4P1 393 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 FREM3P0C091 2139 aa11.12□□□□□ -0.63
TFF3-202ENST00000398431 ACANP16112 2415 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ARHGAP21Q5T5U3 1957 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 A0A088AWK7 358 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ATP6AP2A0A1C7CYW4 349 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 NCF1BA6NI72 391 aaPredicted RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 FIGNL2A6NMB9 653 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 NCF1CA8MVU1 366 aaPredicted RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 C17orf105B2RV13 164 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ATP6AP2O75787 350 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 PIAS1O75925 651 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 NADKO95544 446 aaPredicted RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 RFPL3SP0C7P2 107 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 NCF1P14598 390 aaPredicted RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 TNNI3P19429 210 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ZNF10P21506 573 aaPredicted RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 PIGAP37287 484 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 KCNC1P48547 511 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 IGLV3-21P80748 117 aaPredicted RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 ID2Q02363 134 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 STX4Q12846 297 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 CBLBQ13191 982 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 E2F2Q14209 437 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 FASTKD3Q14CZ7 662 aaKnown RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 MPEG1Q2M385 716 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ZNF791Q3KP31 576 aaPredicted RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 OPN5Q6U736 354 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ARSKQ6UWY0 536 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 DGAT2L6Q6ZPD8 337 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 GK5Q6ZS86 529 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 FAM47EQ6ZV65 393 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 SEM1Q6ZVN7 128 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ADAMTSL2Q86TH1 951 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ZNF473Q8WTR7 871 aaKnown RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 FOXC2Q99958 501 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 DERL2Q9GZP9 239 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 LYRM4Q9HD34 91 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 SACM1LQ9NTJ5 587 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 CCM2LQ9NUG4 571 aaPredicted RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 DNAJC11Q9NVH1 559 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 DNAJB12Q9NXW2 375 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms