RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 DUSP7Q16829 419 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TMEM52BQ4KMG9 183 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 RPS26P11Q5JNZ5 115 aaPredicted RBP17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TMEM236Q5W0B7 351 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 C17orf64Q86WR6 236 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 KRT78Q8N1N4 520 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 AP1M2Q9Y6Q5 423 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 IGLON5A6NGN9 336 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 DGKEP52429 567 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ZNF630Q2M218 657 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CCDC58Q4VC31 144 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TNFAIP8L2Q6P589 184 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 DCUN1D3Q8IWE4 304 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 FAM20CQ8IXL6 584 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SPERTQ8NA61 448 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SUSD6Q92537 303 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 GTPBP3Q969Y2 492 aaKnown RBP17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ZNF486Q96H40 463 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SIGLEC11Q96RL6 698 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ZNF717Q9BY31 904 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SLC6A14Q9UN76 642 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 OR2A25A4D2G3 310 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 H7BY64 318 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 NADKO95544 446 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ARAFP10398 606 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 UBL4AP11441 157 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CD36P16671 472 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SLC19A1P41440 591 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CRB2Q5IJ48 1285 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CEACAM20Q6UY09 585 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 IPCEF1Q8WWN9 437 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 MTERF3Q96E29 417 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ASB16Q96NS5 453 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PRAP1Q96NZ9 151 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 HOXD1Q9GZZ0 328 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ACER3Q9NUN7 267 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PCDHGA2Q9Y5H1 932 aa17.47■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TRBC2A0A5B9 178 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 WASP42768 502 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 MAPK12P53778 367 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PCBP3P57721 371 aaKnown RBP17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 DSTNP60981 165 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 KHDRBS2Q5VWX1 349 aaKnown RBP17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PNCKQ6P2M8 343 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 UTS2BQ765I0 119 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 NLGN4XQ8N0W4 816 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 COX14Q96I36 57 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 NECTIN3Q9NQS3 549 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 THSD1Q9NS62 852 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 QPCTLQ9NXS2 382 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PMF1-BGLAPU3KQ54 211 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CLDN25C9JDP6 229 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ANXA8P13928 327 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PRKACBP22694 351 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PLD3Q8IV08 490 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 GEMIN6Q8WXD5 167 aaKnown RBP17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 NLNQ9BYT8 704 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PRSS16Q9NQE7 514 aa17.46■□□□□ 0.39
CHRFAM7A-202ENST00000397827 A0A0G2JN53 185 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 FAM227AF5H4B4 570 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RECKO95980 971 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CXCR2P25025 360 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TGFBR2P37173 567 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 XCR1P46094 333 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CDK3Q00526 305 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 UBE3AQ05086 875 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HSPB3Q12988 150 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZNF846Q147U1 533 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ATAD3BQ5T9A4 648 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 IKBIPQ70UQ0 350 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HORMAD2Q8N7B1 307 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OR5K2Q8NHB8 316 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RHOXF1Q8NHV9 184 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 FGF13Q92913 245 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RAB8BQ92930 207 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 UCN3Q969E3 161 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TM4SF18Q96CE8 201 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PIP5K1AQ99755 562 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GPR83Q9NYM4 423 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PSORS1C1Q9UIG5 152 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HCN2Q9UL51 889 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ANGPT4Q9Y264 503 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 POFUT2Q9Y2G5 429 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OR1A2Q9Y585 309 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SNX11Q9Y5W9 270 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ATG2BQ96BY7 2078 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HEATR5BQ9P2D3 2071 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 NUP210Q8TEM1 1887 aaPredicted RBP17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MUC22E2RYF6 1773 aaPredicted RBP17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LATO43561 262 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 BCHEP06276 602 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ITGA2P17301 1181 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DDCP20711 480 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 UQCRC2P22695 453 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LIPAP38571 399 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MANFP55145 182 aaKnown RBP17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 IFITM3Q01628 133 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 EIF4HQ15056 248 aaKnown RBP17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 WSCD2Q2TBF2 565 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PIP5KL1Q5T9C9 394 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms