RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ERI3O43414 337 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 SH3BP5O60239 455 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 SNRNP200O75643 2136 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 KCNH1O95259 989 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 GNAO1P09471 354 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 SLC35G6P0C7Q6 338 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 ZNF883P0CG24 379 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 GGT1P19440 569 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 PRPS1L1P21108 318 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 TPP2P29144 1249 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 ASMTP46597 345 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 ADARB1P78563 741 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 ZNF763Q0D2J5 394 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 HKDC1Q2TB90 917 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 FAM98BQ52LJ0 330 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 PERM1Q5SV97 790 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 CCNYL2Q5T2Q4 361 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 SLC2A7Q6PXP3 512 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 CAMKVQ8NCB2 501 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 C17orf62Q9BQA9 187 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 TUBA1CQ9BQE3 449 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 LHX9Q9NQ69 397 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 SLAMF8Q9P0V8 285 aa18.34■□□□□ 0.53
PDLIM2-204ENST00000397760 IGHV5-51A0A0C4DH38 117 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 A0A0G2JN53 185 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 KLHL18O94889 574 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 HPRP00739 348 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 NCK1P16333 377 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 PCSK6P29122 969 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 DGKQP52824 942 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 LRRC23Q53EV4 343 aaPredicted RBP18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 ZC3H12BQ5HYM0 836 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 NUDT13Q86X67 352 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 KCT2Q8NC54 265 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 SRFBP1Q8NEF9 429 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 OR2L5Q8NG80 312 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 C16orf78Q8WTQ4 265 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 NAT6Q93015 286 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 UGT2B28Q9BY64 529 aa18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 DDX18Q9NVP1 670 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-204ENST00000397760 ARID1BQ8NFD5 2236 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 P2RX6O15547 441 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 PRMT3O60678 531 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 C9P02748 559 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 EIF2S1P05198 315 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 IL6P05231 212 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 CDK4P11802 303 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 CSF2RBP32927 897 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 SSR2P43308 183 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 OR4D2P58180 307 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 EPS8Q12929 822 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 DCTN2Q13561 401 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 PROX2Q3B8N5 592 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 FAM174BQ3ZCQ3 159 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 TRIM40Q6P9F5 258 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 ABHD17CQ6PCB6 329 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 WDR74Q6RFH5 385 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 DNAJC22Q8N4W6 341 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 SUMF1Q8NBK3 374 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 CYGBQ8WWM9 190 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 TMIGD2Q96BF3 282 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 KCNC2Q96PR1 638 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 TEFMQ96QE5 360 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 CCDC3Q9BQI4 270 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 LRFN3Q9BTN0 628 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 DDX31Q9H8H2 851 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 DNAAF2Q9NVR5 837 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 TMEM9Q9P0T7 183 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 ADAM29Q9UKF5 820 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 BTBD3Q9Y2F9 522 aa18.33■□□□□ 0.52
PDLIM2-204ENST00000397760 A0A1B0GVG6 124 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 C4orf51C9J302 202 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 CASC3O15234 703 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 HCRTR1O43613 425 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 CKMT1AP12532 417 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 ALDH3A2P51648 485 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 ARFIP1P53367 373 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 MAPK12P53778 367 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 VSX2P58304 361 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 TAS2R50P59544 299 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 RAB8AP61006 207 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 HPCAP84074 193 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 DAB2P98082 770 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 TGM3Q08188 693 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 TCF15Q12870 199 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 DEFB110Q30KQ9 67 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 SPANXN4Q5MJ08 99 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 DGLUCYQ7Z3D6 616 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 MCATQ8IVS2 390 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 TMEM132CQ8N3T6 1108 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 ZNF655Q8N720 491 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 TESCQ96BS2 214 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 DOK1Q99704 481 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 TBCDQ9BTW9 1192 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 SOHLH2Q9NX45 425 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 PCDHGB2Q9Y5G2 931 aa18.32■□□□□ 0.52
PDLIM2-204ENST00000397760 MN1Q10571 1320 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 URADA6NGE7 173 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 ZBTB11O95625 1053 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms