RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 OCLNQ16625 522 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 RNF180Q86T96 592 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 TMEM159Q96B96 161 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 PPCDCQ96CD2 204 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 PTPN18Q99952 460 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SPATA6Q9NWH7 488 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 GPR83Q9NYM4 423 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 STOX2Q9P2F5 926 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 RGRP47804 291 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PSMA6P60900 246 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 IRF3Q14653 427 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 KIAA1211LQ6NV74 962 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 BRAT1Q6PJG6 821 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 FAM151BQ6UXP7 276 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PARP16Q8N5Y8 322 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PROKR2Q8NFJ6 384 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RNASE11Q8TAA1 199 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CEP76Q8TAP6 659 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ASB15Q8WXK1 588 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 HHIPL1Q96JK4 782 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 BBS4Q96RK4 519 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 FLRT1Q9NZU1 646 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 SLAMF8Q9P0V8 285 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 HCN4Q9Y3Q4 1203 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 HMX3A6NHT5 357 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 B3GALNT1O75752 331 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 POMCP01189 267 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ANXA3P12429 323 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CA5AP35218 305 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 BTN1A1Q13410 526 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF234Q14588 700 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 NADSYN1Q6IA69 706 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ADNP2Q6IQ32 1131 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 NOXRED1Q6NXP6 359 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 FAM20CQ8IXL6 584 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 LRRC56Q8IYG6 542 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 SYNPOQ8N3V7 929 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 FAM98AQ8NCA5 519 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 MDGA1Q8NFP4 955 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PPP1R13LQ8WUF5 828 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RAD51AP1Q96B01 352 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PAAF1Q9BRP4 392 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 DOHHQ9BU89 302 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 KCNN2Q9H2S1 579 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PPA2Q9H2U2 334 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RANGRFQ9HD47 186 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 IRAK3Q9Y616 596 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 BRCA1P38398 1863 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 OR7A17O14581 309 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ENPP3O14638 875 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TLL1O43897 1013 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TMEM127O75204 238 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RP2O75695 350 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 FHP07954 510 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 DNASE1P24855 282 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RPS5P46782 204 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PITPNAQ00169 270 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 DBPQ10586 325 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 FGFBP1Q14512 234 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CTSL3PQ5NE16 218 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 KIAA1161Q6NSJ0 714 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 LRRN1Q6UXK5 716 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TPGS1Q6ZTW0 290 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 VWA5B2Q8N398 1253 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TMEM130Q8N3G9 435 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 Q8N402 240 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 FAM129BQ96TA1 746 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ZCCHC2Q9C0B9 1178 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CD93Q9NPY3 652 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 NANSQ9NR45 359 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 DNAJC27Q9NZQ0 273 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 VPS29Q9UBQ0 182 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 KCND3Q9UK17 655 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CORINQ9Y5Q5 1042 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 MAGED1Q9Y5V3 778 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 FKBP7Q9Y680 259 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 F5P12259 2224 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TTC34A8MYJ7 566 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 EEF1E1O43324 174 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ABLIM3O94929 683 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 STSP08842 583 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CD6P30203 668 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 MASP1P48740 699 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PRMT2P55345 433 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TAS2R41P59536 307 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TARDBPQ13148 414 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ABRAXAS2Q15018 415 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ADPRMQ3LIE5 342 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RNF44Q7L0R7 432 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CFAP206Q8IYR0 622 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CLDN22Q8N7P3 220 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF615Q8N8J6 731 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ALG14Q96F25 216 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 QRFPRQ96P65 431 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 XKR8Q9H6D3 395 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 AHSPQ9NZD4 102 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RHCGQ9UBD6 479 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ICKQ9UPZ9 632 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 N6AMT1Q9Y5N5 214 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 IQCF5A8MTL0 148 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms