RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LRRC58Q96CX6 371 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 ITCHQ96J02 903 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 CLPTM1LQ96KA5 538 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 PANX1Q96RD7 426 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 C1orf21Q9H246 121 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 SERHLQ9NQF3 203 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 GID8Q9NWU2 228 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 FAM120CQ9NX05 1096 aaKnown RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 CROTQ9UKG9 612 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 PRSS51A0A1B0GVH4 220 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 RFXANKO14593 260 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 PDPK1O15530 556 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 KCNH1O95259 989 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 ANP32DO95626 131 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 C6orf47O95873 294 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 ITIH1P19827 911 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 PSME3P61289 254 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 ID2Q02363 134 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 TRMT5Q32P41 509 aaKnown RBP19.99■□□□□ 0.79
CPNE1-204ENST00000397443 COQ5Q5HYK3 327 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 SLC48A1Q6P1K1 146 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 VPS37AQ8NEZ2 397 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 COL26A1Q96A83 441 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 MCUR1Q96AQ8 359 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 ROPN1LQ96C74 230 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 CMKLR1Q99788 373 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 MS4A12Q9NXJ0 267 aa19.99■□□□□ 0.79
CPNE1-204ENST00000397443 POLR1CO15160 346 aaPredicted RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 GSC2O15499 205 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 CSO75390 466 aaKnown RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 CCKBRP32239 447 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 FEN1P39748 380 aaKnown RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 ARSFP54793 590 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 EMP3P54852 163 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 RAB38P57729 211 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 DNAL1Q4LDG9 190 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 HES3Q5TGS1 186 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 ANXA8L1Q5VT79 327 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 OR4A15Q8NGL6 344 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 PMEPA1Q969W9 287 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 CLIP3Q96DZ5 547 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 NPLQ9BXD5 320 aaPredicted RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 SLAMF7Q9NQ25 335 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 SLC35C2Q9NQQ7 365 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 AKAP7Q9P0M2 348 aaPredicted RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 PCDHGA7Q9Y5G6 932 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 PCDHGA1Q9Y5H4 931 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 FER1L5A0AVI2 2057 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 A0A1B0GX78 115 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 A0A1W2PRB8 838 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 PMS2P1A4D2B8 440 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 FXYD1O00168 92 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 NVLO15381 856 aaKnown RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 LDB3O75112 727 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 MT-CO3P00414 261 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 RNH1P13489 461 aaKnown RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 PGM1P36871 562 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 ISXQ2M1V0 245 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 DLEU7Q6UYE1 221 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 PGAM4Q8N0Y7 254 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 CLEC4FQ8N1N0 589 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 DPP10Q8N608 796 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 RNF148Q8N7C7 305 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 SLC38A9Q8NBW4 561 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 OR51Q1Q8NH59 317 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 AURKBQ96GD4 344 aaPredicted RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 CDRT15Q96T59 188 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 STRADBQ9C0K7 418 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 ADA2Q9NZK5 511 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 CES1P1Q9UKY3 287 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 ERVK-11Q9UQG0 969 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 LOXL2Q9Y4K0 774 aa19.98■□□□□ 0.79
CPNE1-204ENST00000397443 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.98■□□□□ 0.79
CPNE1-204ENST00000397443 OR2W5A6NFC9 320 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 CYR61O00622 381 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 DSCR3O14972 297 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 B4GALT2O60909 372 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 JRKO75564 520 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 DNAJC8O75937 253 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-204ENST00000397443 XCR1P46094 333 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 GCGRP47871 477 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 MAPK10P53779 464 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 MANFP55145 182 aaKnown RBP19.97■□□□□ 0.79
CPNE1-204ENST00000397443 HSPB3Q12988 150 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 NIPAL1Q6NVV3 410 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 ZNF621Q6ZSS3 439 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 ZNF551Q7Z340 670 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-204ENST00000397443 BMPERQ8N8U9 685 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 BBS4Q96RK4 519 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 EHD3Q9NZN3 535 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 VAPAQ9P0L0 249 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 TRPC4Q9UBN4 977 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 PCDHB14Q9Y5E9 798 aa19.97■□□□□ 0.79
CPNE1-204ENST00000397443 H0YIG0 161 aa19.96■□□□□ 0.79
CPNE1-204ENST00000397443 RNASET2O00584 256 aaKnown RBP19.96■□□□□ 0.79
CPNE1-204ENST00000397443 FTH1P19P0C7X4 201 aa19.96■□□□□ 0.79
CPNE1-204ENST00000397443 HBA1P69905 142 aa19.96■□□□□ 0.79
CPNE1-204ENST00000397443 RABL3Q5HYI8 236 aa19.96■□□□□ 0.79
CPNE1-204ENST00000397443 ARHGAP40Q5TG30 622 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms