RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 OR4F3Q6IEY1 312 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 SHISA5Q8N114 240 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 CA13Q8N1Q1 262 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 EFCAB3Q8N7B9 438 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 PRPF18Q99633 342 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 FAIM2Q9BWQ8 316 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 EFCAB1Q9HAE3 211 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 MAP10Q9P2G4 905 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 PHF11Q9UIL8 331 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 LEF1Q9UJU2 399 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 RARRES3Q9UL19 164 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 PCDHA9Q9Y5H5 950 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 NUP210LQ5VU65 1888 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 AIM2O14862 343 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 SCN2BO60939 215 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 DXOO77932 396 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 CPOXP36551 454 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 ALDH9A1P49189 494 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 NUDT2P50583 147 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 ARSFP54793 590 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 SKP1P63208 163 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 GABREP78334 506 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 MPEG1Q2M385 716 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 MMEL1Q495T6 779 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 SLC2A7Q6PXP3 512 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 MSANTD1Q6ZTZ1 278 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 TTLL10Q6ZVT0 673 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 TICAM1Q8IUC6 712 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 RBM15BQ8NDT2 890 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 FGF11Q92914 225 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 PPCDCQ96CD2 204 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 MVB12AQ96EY5 273 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 OR52E6Q96RD3 313 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 CSF3RQ99062 836 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 NDC1Q9BTX1 674 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 DUSP26Q9BV47 211 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 BHLHE41Q9C0J9 482 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 C1orf21Q9H246 121 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 APMAPQ9HDC9 416 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 MIEF1Q9NQG6 463 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 FAM120CQ9NX05 1096 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 MS4A12Q9NXJ0 267 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 TAS2R1Q9NYW7 299 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 EHD3Q9NZN3 535 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 SH3BP4Q9P0V3 963 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 SATB2Q9UPW6 733 aa15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 TMEM184BQ9Y519 407 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-205ENST00000397406 C1orf226A1L170 272 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 H0YIG0 161 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 DSCR3O14972 297 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 CHST10O43529 356 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 TIAF1O95411 115 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 NR2F6P10588 404 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 FGF5P12034 268 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 CPN2P22792 545 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 PTPN4P29074 926 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 NUP214P35658 2090 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 AVPR1BP47901 424 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 MC2RQ01718 297 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 CYB5D1Q6P9G0 228 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 IGSF10Q6WRI0 2623 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 ASRGL1Q7L266 308 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 BPHLQ86WA6 291 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 DPP10Q8N608 796 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 METTL27Q8N6F8 245 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 FAM47BQ8NA70 645 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 GTF2H4Q92759 462 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 MMABQ96EY8 250 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 LRMDAQ9H2I8 198 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 PRORYQ9H606 182 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 POLR1BQ9H9Y6 1135 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 CLK4Q9HAZ1 481 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 SERHLQ9NQF3 203 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 ATAD3AQ9NVI7 634 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 TAS2R7Q9NYW3 318 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 DHCR7Q9UBM7 475 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 CES1P1Q9UKY3 287 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 SRPK3Q9UPE1 567 aa15.97■□□□□ 0.15
TSPAN4-205ENST00000397406 TMX2-CTNND1H3BSU7 103 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 CYR61O00622 381 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 PGRMC2O15173 223 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 CCL4P13236 92 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 ITGAXP20702 1163 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 BUD31P41223 144 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 RASSF2P50749 326 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 RAB38P57729 211 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 MXRA7P84157 204 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 SLC25A3Q00325 362 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 TLE3Q04726 772 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 IL11RAQ14626 422 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 MAPKAPK3Q16644 382 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 RHBDD2Q6NTF9 364 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 PWWP2BQ6NUJ5 590 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 SLC48A1Q6P1K1 146 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 HACD2Q6Y1H2 254 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 PPP1R3BQ86XI6 285 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 PCYOX1LQ8NBM8 494 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 BTBD10Q9BSF8 475 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 STRADBQ9C0K7 418 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 PRDM9Q9NQV7 894 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms