RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 USP41Q3LFD5 358 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 MACC1Q6ZN28 852 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 ZER1Q7Z7L7 766 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 TOMM5Q8N4H5 51 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 OR5K1Q8NHB7 308 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 TCEAL4Q96EI5 215 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 CSPG4P5Q96PW8 444 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 KCNA7Q96RP8 456 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 SLIRPQ9GZT3 109 aaKnown RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 DPAGT1Q9H3H5 408 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 GPN3Q9UHW5 284 aaPredicted RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 TRIP12Q14669 1992 aaPredicted RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 FAM74A7A6NL05 159 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 OR5K4A6NMS3 321 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 OR2AT4A6NND4 320 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 CDC7O00311 574 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 RTCAO00442 366 aaKnown RBP8.09□□□□□ -1.12
NDE1-202ENST00000396355 PGRMC2O15173 223 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 PSMD3O43242 534 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 NME1P15531 152 aaKnown RBP8.09□□□□□ -1.12
NDE1-202ENST00000396355 SMPD1P17405 629 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 IGFBP6P24592 240 aaPredicted RBP8.09□□□□□ -1.12
NDE1-202ENST00000396355 PPT1P50897 306 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 TUBB3Q13509 450 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 NAE1Q13564 534 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 FAM74A3Q4VXF1 159 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 CES5AQ6NT32 575 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 AGMOQ6ZNB7 445 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 USP45Q70EL2 814 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 BEND5Q7L4P6 421 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 LAPTM4BQ86VI4 370 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 ATCAYQ86WG3 371 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 PRSS58Q8IYP2 241 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 PHACTR4Q8IZ21 702 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 MS4A15Q8N5U1 240 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 ZNF655Q8N720 491 aaPredicted RBP8.09□□□□□ -1.12
NDE1-202ENST00000396355 B3GALNT2Q8NCR0 500 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 STK35Q8TDR2 534 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 TWIST2Q8WVJ9 160 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 FCGR1BQ92637 280 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 KCNJ9Q92806 393 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 ZNF419Q96HQ0 510 aaPredicted RBP8.09□□□□□ -1.12
NDE1-202ENST00000396355 CACNG6Q9BXT2 260 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 ZDHHC4Q9NPG8 344 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 CLDND1Q9NY35 253 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 GTF2IRD1Q9UHL9 959 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 KLHL21Q9UJP4 597 aa8.09□□□□□ -1.12
NDE1-202ENST00000396355 SHROOM3Q8TF72 1996 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 NUP205Q92621 2012 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 URADA6NGE7 173 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 HOXA2O43364 376 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 GRID2O43424 1007 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 SDC3O75056 442 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 ADAMTS4O75173 837 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 CNTN5O94779 1100 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 CPNE6O95741 557 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 ATXN8OSP0DMR3 200 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 GNG10P50151 68 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 UFM1P61960 85 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 PRKCDQ05655 676 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 DYRK1AQ13627 763 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 COL28A1Q2UY09 1125 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 PARP15Q460N3 678 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 SLC16A12Q6ZSM3 486 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 CBLN2Q8IUK8 224 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 ACOT11Q8WXI4 607 aaPredicted RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 REPS1Q96D71 796 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TRMOQ9BU70 441 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 RSRP1Q9BUV0 290 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 OR51J1Q9H342 316 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 FOLH1BQ9HBA9 442 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 RPS10P5Q9NQ39 176 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TUBG2Q9NRH3 451 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 STOX2Q9P2F5 926 aaPredicted RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 EXTL2Q9UBQ6 330 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 FBXL3Q9UKT7 428 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 CLCA1A8K7I4 914 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 CXCR6O00574 342 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 CCL22O00626 93 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 STX16O14662 325 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 AKAP8O43823 692 aaKnown RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 MFSD11O43934 449 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 RAB3DO95716 219 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 NR2F6P10588 404 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TMEM11P17152 192 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 CLCN7P51798 805 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 RFTN1Q14699 578 aaPredicted RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 MFSD13AQ14CX5 517 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 GTF2IRD2BQ6EKJ0 949 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TMCO2Q7Z6W1 182 aaPredicted RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 GTF2IRD2Q86UP8 949 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TXNDC5Q8NBS9 432 aaKnown RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 SETD6Q8TBK2 473 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 HASPINQ8TF76 798 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 DOK1Q99704 481 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 KATNBL1Q9H079 304 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 DDX31Q9H8H2 851 aaKnown RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 VSX1Q9NZR4 365 aaPredicted RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 H2AFY2Q9P0M6 372 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms