RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 RNF4P78317 190 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 DDX39BQ13838 428 aaKnown RBP15.2■□□□□ 0.02
DDR1-229ENST00000396342 WLSQ5T9L3 541 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 SLC29A4Q7RTT9 530 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 ZNF227Q86WZ6 799 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 FAM109AQ8N4B1 249 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 SLC2A12Q8TD20 617 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 TANKQ92844 425 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 SMC6Q96SB8 1091 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 ACTR8Q9H981 624 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 IL1RL2Q9HB29 575 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 MCCC2Q9HCC0 563 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 BOKQ9UMX3 212 aaPredicted RBP15.2■□□□□ 0.02
DDR1-229ENST00000396342 EDARQ9UNE0 448 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 ACOT9Q9Y305 439 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 PCDHGA11Q9Y5H2 935 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 ABCA12Q86UK0 2595 aa15.2■□□□□ 0.02
DDR1-229ENST00000396342 NBPF19A0A087WUL8 3843 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 A0A087X1B8 175 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 CTAGE15A4D2H0 777 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 C4orf51C9J302 202 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 LDB3O75112 727 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 TGFB1P01137 390 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 HOXD4P09016 255 aaPredicted RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 PTX3P26022 381 aaPredicted RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 SERPINB3P29508 390 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 CASQ1P31415 396 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 CASP2P42575 452 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 KIR3DL1P43629 444 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 HK2P52789 917 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 PLTPP55058 493 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 KCNJ2P63252 427 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 PMPCAQ10713 525 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 SLAMF1Q13291 335 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 SLC10A1Q14973 349 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 OR4D1Q15615 310 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 FBXO48Q5FWF7 155 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 KHDRBS2Q5VWX1 349 aaKnown RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 CES4AQ5XG92 561 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 HLA-DQA1Q5Y7H0 255 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 OR4C11Q6IEV9 310 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 ZNF585AQ6P3V2 769 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 CYP20A1Q6UW02 462 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 CTAGE6Q86UF2 777 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 CDH24Q86UP0 819 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 LIX1Q8N485 282 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 SLC15A4Q8N697 577 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 OR52N2Q8NGI0 321 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 LILRB4Q8NHJ6 448 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 PTPMT1Q8WUK0 201 aaPredicted RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 SREK1Q8WXA9 508 aaKnown RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 ESAMQ96AP7 390 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 CSF3RQ99062 836 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 ZNF559Q9BR84 538 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 TTTY12Q9BZ98 90 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 RPF2Q9H7B2 306 aaKnown RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 LIN28AQ9H9Z2 209 aaKnown RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 PRDM7Q9NQW5 492 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 ALKBH4Q9NXW9 302 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 ZNF490Q9ULM2 529 aaPredicted RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 TNPO3Q9Y5L0 923 aaKnown RBP15.19■□□□□ 0.02
DDR1-229ENST00000396342 SCN3AQ9NY46 2000 aa15.19■□□□□ 0.02
DDR1-229ENST00000396342 CPAMD8Q8IZJ3 1885 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 ATP6AP2A0A1C7CYW4 349 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 FAM159BA6NKW6 160 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 KERAO60938 352 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 SH3BGRLO75368 114 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 ATP6AP2O75787 350 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 ACVR2AP27037 513 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 PHBP35232 272 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 PIK3CBP42338 1070 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 STT3AP46977 705 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 HNRNPFP52597 415 aaKnown RBP15.18■□□□□ 0.02
DDR1-229ENST00000396342 RPP38P78345 283 aaKnown RBP15.18■□□□□ 0.02
DDR1-229ENST00000396342 MYBPHQ13203 477 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 SF3B4Q15427 424 aaKnown RBP eCLIP15.18■□□□□ 0.02
DDR1-229ENST00000396342 MPEG1Q2M385 716 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 ZNF750Q32MQ0 723 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 GXYLT1Q4G148 440 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 SLC22A10Q63ZE4 541 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 B3GNT6Q6ZMB0 384 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 GPR180Q86V85 440 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 TAGAPQ8N103 731 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 TEX9Q8N6V9 391 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 ATP6V1E2Q96A05 226 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 MAPKAP1Q9BPZ7 522 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 MS4A8Q9BY19 250 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 ENKD1Q9H0I2 346 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 LYARQ9NX58 379 aaKnown RBP15.18■□□□□ 0.02
DDR1-229ENST00000396342 RNF6Q9Y252 685 aa15.18■□□□□ 0.02
DDR1-229ENST00000396342 SCN2AQ99250 2005 aa15.17■□□□□ 0.02
DDR1-229ENST00000396342 MYOCOSA0A1B0GUC4 107 aa15.17■□□□□ 0.02
DDR1-229ENST00000396342 CXorf49A8MYA2 514 aaPredicted RBP15.17■□□□□ 0.02
DDR1-229ENST00000396342 G3V3Y1 287 aa15.17■□□□□ 0.02
DDR1-229ENST00000396342 C19orf84I3L1E1 186 aa15.17■□□□□ 0.02
DDR1-229ENST00000396342 SAP18O00422 153 aaKnown RBP15.17■□□□□ 0.02
DDR1-229ENST00000396342 ZNHIT1O43257 154 aa15.17■□□□□ 0.02
DDR1-229ENST00000396342 WDR1O75083 606 aa15.17■□□□□ 0.02
DDR1-229ENST00000396342 PIAS1O75925 651 aa15.17■□□□□ 0.02
DDR1-229ENST00000396342 ZWINTO95229 277 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms