RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 NME4O00746 187 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 ERAL1O75616 437 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 SORBS2O94875 1100 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 ABCB1P08183 1280 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 ME2P23368 584 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 AVPR1BP47901 424 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 RUNDC3AQ59EK9 446 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 MSRB3Q8IXL7 192 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 DTWD1Q8N5C7 304 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 OR8J3Q8NGG0 315 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 CSF3RQ99062 836 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 SLC35C2Q9NQQ7 365 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 CMTM6Q9NX76 183 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 NEUROG3Q9Y4Z2 214 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 WASHC1A8K0Z3 465 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 CBFA2T3O75081 653 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 PTPN6P29350 595 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 MTPNP58546 118 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 SHC2P98077 582 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 TRA2AQ13595 282 aaKnown RBP eCLIP19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 C6orf163Q5TEZ5 329 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 MMABQ96EY8 250 aaPredicted RBP19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 SH3GL1Q99961 368 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 NDC1Q9BTX1 674 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 RPF2Q9H7B2 306 aaKnown RBP19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 CES1P1Q9UKY3 287 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 PSME2Q9UL46 239 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 VPS4AQ9UN37 437 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 HCN4Q9Y3Q4 1203 aa19.28■□□□□ 0.68
VCPKMT-202ENST00000395860 CHST10O43529 356 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 HOXB9P17482 250 aaPredicted RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 TCN1P20061 433 aaPredicted RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 NTSP30990 170 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 MANFP55145 182 aaKnown RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 PCBP4P57723 403 aaKnown RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 RAB38P57729 211 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 HBA1P69905 142 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 ELF3P78545 371 aaPredicted RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 OR52E8Q6IFG1 317 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 TTLL10Q6ZVT0 673 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 GOT1L1Q8NHS2 421 aaPredicted RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 ZBED6CLQ96FA7 236 aaPredicted RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 OR6C1Q96RD1 312 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 BBS4Q96RK4 519 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 CDC6Q99741 560 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 THUMPD3Q9BV44 507 aaKnown RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 GIMAP4Q9NUV9 329 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 TAS2R9Q9NYW1 312 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 ZNF282Q9UDV7 671 aaPredicted RBP19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 NDOR1Q9UHB4 597 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 ERVK-11Q9UQG0 969 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 ENTPD4Q9Y227 616 aa19.27■□□□□ 0.68
VCPKMT-202ENST00000395860 PRORSD1PA6NEY8 169 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 A8MUI8 341 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 ALAS2P22557 587 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 FRKP42685 505 aaPredicted RBP19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 ARSFP54793 590 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 SIM1P81133 766 aaPredicted RBP19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 SELPLGQ14242 412 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 CCDC157Q569K6 752 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 C1orf146Q5VVC0 180 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 NET1Q7Z628 596 aaPredicted RBP19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 METTL27Q8N6F8 245 aaPredicted RBP19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 FAM156AQ8NDB6 213 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 OR5P2Q8WZ92 322 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 AURKBQ96GD4 344 aaPredicted RBP19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 PHF12Q96QT6 1004 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 SLAMF7Q9NQ25 335 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 ACSS1Q9NUB1 689 aaPredicted RBP19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 HCN3Q9P1Z3 774 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 CD300AQ9UGN4 299 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 ZNF780BQ9Y6R6 833 aa19.27■□□□□ 0.67
VCPKMT-202ENST00000395860 COL27A1Q8IZC6 1860 aaPredicted RBP19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 H0YIG0 161 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 ZNF749O43361 778 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 ZCCHC18P0CG32 403 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 TGM1P22735 817 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 CSTF2P33240 577 aaKnown RBP eCLIP19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 EEFSECP57772 596 aaKnown RBP19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 ZFP36L1Q07352 338 aaKnown RBP19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 PRAMEF17Q5VTA0 474 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 YOD1Q5VVQ6 348 aaPredicted RBP19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 B3GNT8Q7Z7M8 397 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 TRIML2Q8N7C3 387 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 ZFP28Q8NHY6 868 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 CPPED1Q9BRF8 314 aaPredicted RBP19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 CLK4Q9HAZ1 481 aaKnown RBP19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 PRDM9Q9NQV7 894 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 RARRES3Q9UL19 164 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 POMPQ9Y244 141 aa19.26■□□□□ 0.67
VCPKMT-202ENST00000395860 CYR61O00622 381 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 GDF9O60383 454 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 C8orf89P0DMQ9 161 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 RNH1P13489 461 aaKnown RBP19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 MSX2P35548 267 aaPredicted RBP19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 LIPEQ05469 1076 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 HSPB3Q12988 150 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 SPATS1Q496A3 300 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 ZNF551Q7Z340 670 aaPredicted RBP19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 WDR60Q8WVS4 1066 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms