RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ZBED6CLQ96FA7 236 aaPredicted RBP12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 UGT2B28Q9BY64 529 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 PIGMQ9H3S5 423 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 CXorf56Q9H5V9 222 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 CHRAC1Q9NRG0 131 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 ZNF226Q9NYT6 803 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 CNOT11Q9UKZ1 510 aaKnown RBP12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 CMYA5Q8N3K9 4069 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 TRBC2A0A5B9 178 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 ERI2A8K979 691 aaKnown RBP12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 H3BMM5 538 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 OVOL3O00110 214 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 AVILO75366 819 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 SYF2O95926 243 aaKnown RBP12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 SCTRP47872 440 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 CPA2P48052 419 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 RAB8AP61006 207 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 ETF1P62495 437 aaKnown RBP12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 KCNJ2P63252 427 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 TBL3Q12788 808 aaKnown RBP12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 PRAMEF20Q5VT98 475 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 FNDC7Q5VTL7 733 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 LCTLQ6UWM7 567 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 C17orf64Q86WR6 236 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 TMEM132CQ8N3T6 1108 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 PRELID2Q8N945 189 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 OSBPL8Q9BZF1 889 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 SPNS1Q9H2V7 528 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 RHBGQ9H310 441 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 KLHL31Q9H511 634 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 PSD3Q9NYI0 1048 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 ZFP69BQ9UJL9 534 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 CAMK2AQ9UQM7 478 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 DYSFO75923 2080 aa12.48□□□□□ -0.41
VCPKMT-201ENST00000395859 FREM1Q5H8C1 2179 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 MACROD2A1Z1Q3 448 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 LRRC14BA6NHZ5 514 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 OR1F1O43749 312 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 MPC1LP0DKB6 136 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 GRK3P35626 688 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 CDK9P50750 372 aaKnown RBP12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 RUNX2Q13950 521 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 CCDC181Q5TID7 509 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 RAD9BQ6WBX8 426 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 RNF10Q8N5U6 811 aaKnown RBP12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 ANKRD9Q96BM1 317 aaPredicted RBP12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 SPACA9Q96E40 222 aaPredicted RBP12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 G6PC3Q9BUM1 346 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 LRTM1Q9HBL6 345 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 PRTFDC1Q9NRG1 225 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 KLHL42Q9P2K6 505 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 VTI1BQ9UEU0 232 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 PACSIN3Q9UKS6 424 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 SLC6A5Q9Y345 797 aa12.47□□□□□ -0.41
VCPKMT-201ENST00000395859 ANKRD33BA6NCL7 494 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 MSTNO14793 375 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 ZBTB14O43829 449 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 AHRP35869 848 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 RGS1Q08116 209 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 ASPHQ12797 758 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 BMPR2Q13873 1038 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 PLXDC2Q6UX71 529 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 SH2D5Q6ZV89 423 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 ZNF611Q8N823 705 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 ANKRD53Q8N9V6 530 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 OR5L2Q8NGL0 311 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 OR14A16Q8NHC5 309 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 NUBPLQ8TB37 319 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 DAZLQ92904 295 aaKnown RBP12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 TMEM204Q9BSN7 226 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 CNIH4Q9P003 139 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 CLCF1Q9UBD9 225 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 CLCA3PQ9Y6N3 262 aa12.46□□□□□ -0.41
VCPKMT-201ENST00000395859 NOTCH1P46531 2555 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 EIF3FO00303 357 aaPredicted RBP12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 CYR61O00622 381 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 SNPHO15079 494 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 KLF4O43474 513 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 GPRIN2O60269 458 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 GDF1P27539 372 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 UGT2B10P36537 528 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 CD79BP40259 229 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 MAGEA1P43355 309 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 CCR8P51685 355 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 KIF5AQ12840 1032 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 UBAP2Q5T6F2 1119 aaKnown RBP12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 ZNF474Q6S9Z5 364 aaPredicted RBP12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 MBOAT1Q6ZNC8 495 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 ZNF595Q8IYB9 648 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 OR10G3Q8NGC4 313 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 SLC2A12Q8TD20 617 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 INTS12Q96CB8 462 aaKnown RBP12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 OR4K3Q96R72 315 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 TCF12Q99081 682 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 TM9SF2Q99805 663 aa12.45□□□□□ -0.42
VCPKMT-201ENST00000395859 TUBA1CQ9BQE3 449 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms