RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 AZIN1O14977 448 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 PROM1O43490 865 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 CTNSO60931 367 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 LDB3O75112 727 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 SNNO75324 88 aaPredicted RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 PPP2R1BP30154 601 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 ABCE1P61221 599 aaKnown RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 ID2Q02363 134 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 ACTN3Q08043 901 aaPredicted RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 BST1Q10588 318 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 CCNYL2Q5T2Q4 361 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 HOMEZQ8IX15 550 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 C1orf52Q8N6N3 182 aaKnown RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 GBP7Q8N8V2 638 aaPredicted RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 APIPQ96GX9 242 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 THOC3Q96J01 351 aaKnown RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 TUBB6Q9BUF5 446 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 SLC25A18Q9H1K4 315 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 ZNF552Q9H707 407 aaPredicted RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 ZNF395Q9H8N7 513 aaPredicted RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 RIC8BQ9NVN3 520 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 NMRK1Q9NWW6 199 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 LYARQ9NX58 379 aaKnown RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 GPR83Q9NYM4 423 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 PHF11Q9UIL8 331 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 ADAM29Q9UKF5 820 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 TP53TG5Q9Y2B4 290 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 FIS1Q9Y3D6 152 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 PCDHGA9Q9Y5G4 932 aaKnown RBP15.52■□□□□ 0.08
CXCL1-201ENST00000395761 PTGDR2Q9Y5Y4 395 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 SPACA6W5XKT8 324 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 ITM2AO43736 263 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 LYPLA1O75608 230 aaPredicted RBP15.51■□□□□ 0.07
CXCL1-201ENST00000395761 PRR35P0CG20 571 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 SFTPCP11686 197 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 SLC1A6P48664 564 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 GUCY1A3Q02108 690 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 TNFRSF17Q02223 184 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 BTKQ06187 659 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 ZNF33BQ06732 778 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 MYBPC3Q14896 1274 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 KANK2Q63ZY3 851 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 TCTN3Q6NUS6 607 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 PAPD4Q6PIY7 484 aaKnown RBP15.51■□□□□ 0.07
CXCL1-201ENST00000395761 OR4N5Q8IXE1 308 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 KBTBD2Q8IY47 623 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 LRRC8CQ8TDW0 803 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 PSMF1Q92530 271 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 ANKRD9Q96BM1 317 aaPredicted RBP15.51■□□□□ 0.07
CXCL1-201ENST00000395761 LHPPQ9H008 270 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 RPF2Q9H7B2 306 aaKnown RBP15.51■□□□□ 0.07
CXCL1-201ENST00000395761 EML4Q9HC35 981 aaKnown RBP15.51■□□□□ 0.07
CXCL1-201ENST00000395761 MS4A12Q9NXJ0 267 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 HAO1Q9UJM8 370 aa15.51■□□□□ 0.07
CXCL1-201ENST00000395761 ARHGAP10A1A4S6 786 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 GLOD5A6NK44 160 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 FGF17O60258 216 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 C1QL1O75973 258 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 AIFM1O95831 613 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 SERPINA7P05543 415 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 FGF4P08620 206 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 ITGAMP11215 1152 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 PGDP52209 483 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 RAE1P78406 368 aaKnown RBP15.5■□□□□ 0.07
CXCL1-201ENST00000395761 OCRLQ01968 901 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 BTBD16Q32M84 506 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 UGT3A2Q3SY77 523 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 LACTB2Q53H82 288 aaPredicted RBP15.5■□□□□ 0.07
CXCL1-201ENST00000395761 RIPOR1Q6ZS17 1223 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 ASB18Q6ZVZ8 466 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 PAGE2Q7Z2X7 111 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 TRIM46Q7Z4K8 759 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 AGR3Q8TD06 166 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 LPAR4Q99677 370 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 SMAD5Q99717 465 aaKnown RBP15.5■□□□□ 0.07
CXCL1-201ENST00000395761 ALOXE3Q9BYJ1 711 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 C20orf27Q9GZN8 174 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 TUBB1Q9H4B7 451 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 ZBTB20Q9HC78 741 aaPredicted RBP15.5■□□□□ 0.07
CXCL1-201ENST00000395761 PNO1Q9NRX1 252 aaKnown RBP15.5■□□□□ 0.07
CXCL1-201ENST00000395761 TEX10Q9NXF1 929 aaPredicted RBP15.5■□□□□ 0.07
CXCL1-201ENST00000395761 ZDHHC2Q9UIJ5 367 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 TRAF6Q9Y4K3 522 aa15.5■□□□□ 0.07
CXCL1-201ENST00000395761 TLN1Q9Y490 2541 aaKnown RBP15.49■□□□□ 0.07
CXCL1-201ENST00000395761 BLACEA4D250 179 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 PGRMC2O15173 223 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 POLR3GO15318 223 aaPredicted RBP15.49■□□□□ 0.07
CXCL1-201ENST00000395761 NR2F6P10588 404 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 ICAM2P13598 275 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 TLX1P31314 330 aaPredicted RBP15.49■□□□□ 0.07
CXCL1-201ENST00000395761 MAPK12P53778 367 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 STX4Q12846 297 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 NFATC3Q12968 1075 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 SPDYAQ5MJ70 313 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 SH2D4BQ5SQS7 431 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 PLAG1Q6DJT9 500 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 PTRH1Q86Y79 214 aaKnown RBP15.49■□□□□ 0.07
CXCL1-201ENST00000395761 KIRREL3Q8IZU9 778 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 CLYBLQ8N0X4 340 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms