RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SSR2P43308 183 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 CAPZBP47756 277 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 HSPA13P48723 471 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 CCL7P80098 99 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 TGM3Q08188 693 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 MPEG1Q2M385 716 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 FAM98BQ52LJ0 330 aaKnown RBP18.29■□□□□ 0.52
LMNB1-202ENST00000395354 NT5CQ8TCD5 201 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 NCSTNQ92542 709 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 FAM162AQ96A26 154 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 EME1Q96AY2 570 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 CENPNQ96H22 339 aaPredicted RBP18.29■□□□□ 0.52
LMNB1-202ENST00000395354 LRRN3Q9H3W5 708 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 C8orf4Q9NR00 106 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 TAS2R9Q9NYW1 312 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 TAS2R7Q9NYW3 318 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 EHD3Q9NZN3 535 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 A0A1W2PRB8 838 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 GSAPA4D1B5 854 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 SLC30A4O14863 429 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 DUX1O43812 170 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 RPLP0P05388 317 aaKnown RBP18.28■□□□□ 0.52
LMNB1-202ENST00000395354 RAP2AP10114 183 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 CSRP1P21291 193 aaKnown RBP18.28■□□□□ 0.52
LMNB1-202ENST00000395354 SOX11P35716 441 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 AQP4P55087 323 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 HBA1P69905 142 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 ABHD17CQ6PCB6 329 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 FKBP9P1Q75LS8 142 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 EID3Q8N140 333 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 ZCCHC7Q8N3Z6 543 aaKnown RBP18.28■□□□□ 0.52
LMNB1-202ENST00000395354 TEFMQ96QE5 360 aaKnown RBP18.28■□□□□ 0.52
LMNB1-202ENST00000395354 FAIM2Q9BWQ8 316 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 SLC6A16Q9GZN6 736 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 AICDAQ9GZX7 198 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 ABCG4Q9H172 646 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 RAD21L1Q9H4I0 556 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 MAGIXQ9H6Y5 334 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 DCAF13Q9NV06 445 aaKnown RBP18.28■□□□□ 0.52
LMNB1-202ENST00000395354 CROCCQ5TZA2 2017 aa18.28■□□□□ 0.52
LMNB1-202ENST00000395354 A0A1W2PQM1 296 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 TMPRSS11DO60235 418 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 KCNK5O95279 499 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 C6orf47O95873 294 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 PLA2G16P53816 162 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 CHRNB3Q05901 458 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 SQSTM1Q13501 440 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 VEZF1Q14119 521 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 ATP6AP1Q15904 470 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 VMACQ2NL98 169 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 CCDC157Q569K6 752 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 TOR1AIP1Q5JTV8 583 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 TRIM40Q6P9F5 258 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 ZNF551Q7Z340 670 aaPredicted RBP18.27■□□□□ 0.52
LMNB1-202ENST00000395354 AMIGO2Q86SJ2 522 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 GLRX5Q86SX6 157 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 ZZZ3Q8IYH5 903 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 C10orf111Q8N326 155 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 PACRGLQ8N7B6 248 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 OR5P2Q8WZ92 322 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 C17orf62Q9BQA9 187 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 RAB33BQ9H082 229 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 PRDM7Q9NQW5 492 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 CDV3Q9UKY7 258 aaKnown RBP18.27■□□□□ 0.52
LMNB1-202ENST00000395354 HEATR5BQ9P2D3 2071 aa18.27■□□□□ 0.52
LMNB1-202ENST00000395354 ERI3O43414 337 aaKnown RBP18.26■□□□□ 0.51
LMNB1-202ENST00000395354 FAM58BPP0C7Q3 252 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 UQCRBP14927 111 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 ZNF26P17031 533 aaPredicted RBP18.26■□□□□ 0.51
LMNB1-202ENST00000395354 HIST1H1TP22492 207 aaPredicted RBP18.26■□□□□ 0.51
LMNB1-202ENST00000395354 FRKP42685 505 aaPredicted RBP18.26■□□□□ 0.51
LMNB1-202ENST00000395354 PPP1CAP62136 330 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 CFHR1Q03591 330 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 RGS1Q08116 209 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 ILKQ13418 452 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 GAB1Q13480 694 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 SLC9A5Q14940 896 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 RGNQ15493 299 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 INTS11Q5TA45 600 aaKnown RBP18.26■□□□□ 0.51
LMNB1-202ENST00000395354 MRM1Q6IN84 353 aaKnown RBP18.26■□□□□ 0.51
LMNB1-202ENST00000395354 IRGCQ6NXR0 463 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 FIGLAQ6QHK4 219 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 SPESP1Q6UW49 350 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 ASPGQ86U10 573 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 PLXDC1Q8IUK5 500 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 NCLNQ969V3 563 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 CIDECQ96AQ7 238 aaPredicted RBP18.26■□□□□ 0.51
LMNB1-202ENST00000395354 TM4SF19Q96DZ7 209 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 CHID1Q9BWS9 393 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 ROGDIQ9GZN7 287 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 CHST8Q9H2A9 424 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 SEMA6AQ9H2E6 1030 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 KLHL31Q9H511 634 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 SYNDIG1Q9H7V2 258 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 EPHA6Q9UF33 1036 aa18.26■□□□□ 0.51
LMNB1-202ENST00000395354 ATXN7L1Q9ULK2 861 aaPredicted RBP18.26■□□□□ 0.51
LMNB1-202ENST00000395354 PDPK1O15530 556 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 KRT75O95678 551 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 CPNE6O95741 557 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 EFNA1P20827 205 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms