RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 C7orf57Q8NEG2 295 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 OR8K3Q8NH51 312 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 THAP6Q8TBB0 222 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 DDX1Q92499 740 aaKnown RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 SLC7A11Q9UPY5 501 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 ALG5Q9Y673 324 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 COL1A1P02452 1464 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 E2F3O00716 465 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 VNN2O95498 520 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 LATS1O95835 1130 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 PEPDP12955 493 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 MAN2A2P49641 1150 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 NCEH1Q6PIU2 408 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 ERI1Q8IV48 349 aaKnown RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 PHTF2Q8N3S3 785 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 KRTCAP2Q8N6L1 136 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 OR5L2Q8NGL0 311 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 ABHD5Q8WTS1 349 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 FCRL3Q96P31 734 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 KCNS2Q9ULS6 477 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 EXOSC1Q9Y3B2 195 aaKnown RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 CMAHPQ9Y471 501 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 SH3PXD2BA1X283 911 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 GRXCR2A6NFK2 248 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 UNC119BA6NIH7 251 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 P04436 131 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 CD1DP15813 335 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 ENDOUP21128 410 aaKnown RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 MSX1P28360 303 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 TIA1P31483 386 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 HOXD13P35453 343 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 LPAL2Q16609 132 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 NKAPLQ5M9Q1 402 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 OR4C11Q6IEV9 310 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 ZC3H14Q6PJT7 736 aaKnown RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 PLD6Q8N2A8 252 aaKnown RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 NOP16Q9Y3C1 178 aaKnown RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 PCDHGA6Q9Y5G7 932 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 C10orf71Q711Q0 1435 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF142P52746 1687 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 NPC1O15118 1278 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 THEGLP0DJG4 465 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 S1PR1P21453 382 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 GLDCP23378 1020 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 SLC9A3P48764 834 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 CNPY1Q3B7I2 92 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 KIAA1614Q5VZ46 1190 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 IGDCC3Q8IVU1 814 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 GID4Q8IVV7 300 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 DOK4Q8TEW6 326 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 F2RL3Q96RI0 385 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 H3BUI4 141 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 K7ERQ8 282 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 MAFKO60675 156 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 ATP4BP51164 291 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 CDK10Q15131 360 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 HMGN2P46Q86SG4 172 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 UMODL1-AS1Q8N2C9 162 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 PEX11GQ96HA9 241 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 SLC17A9Q9BYT1 436 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 FN3KQ9H479 309 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 PPP1R3AQ16821 1122 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 SPATS1Q496A3 300 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 CRTC1Q6UUV9 634 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 NXPE4Q6UWF7 544 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 GALNT12Q8IXK2 581 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 BOLLQ8N9W6 283 aaKnown RBP9.96□□□□□ -0.81
COL4A6-203ENST00000394872 DENND6BQ8NEG7 585 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 OR56A3Q8NH54 315 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 MSLNLQ96KJ4 702 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 SIGLEC10Q96LC7 697 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 HSPA12BQ96MM6 686 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 RPF2Q9H7B2 306 aaKnown RBP9.96□□□□□ -0.81
COL4A6-203ENST00000394872 HPF1Q9NWY4 346 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 SLCO3A1Q9UIG8 710 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 PSAT1Q9Y617 370 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF623O75123 536 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 CA3P07451 260 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 IRF2P14316 349 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 AOC1P19801 751 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 F8A1P23610 371 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 LEPRP48357 1165 aaKnown RBP9.96□□□□□ -0.81
COL4A6-203ENST00000394872 GPR143P51810 404 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 SLC18A1P54219 525 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 SRYQ05066 204 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 C3orf33Q6P1S2 294 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 THAP4Q8WY91 577 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 HERPUD2Q9BSE4 406 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 CD207Q9UJ71 328 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 FXYD6-FXYD2A0A087WZ82 144 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 ACOT7O00154 380 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 KLF11O14901 512 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 PGCP20142 388 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 MAGEA12P43365 314 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 GALK2Q01415 458 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 DLX2Q07687 328 aaPredicted RBP9.96□□□□□ -0.81
COL4A6-203ENST00000394872 ZSWIM9Q86XI8 627 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 GMLQ99445 158 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF700Q9H0M5 742 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 FXYD6Q9H0Q3 95 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms