RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PNLIPRP1P54315 467 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 TBPL1P62380 186 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 UBE3AQ05086 875 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 AGAP6Q5VW22 663 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 ZNF480Q8WV37 535 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 REPS1Q96D71 796 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 CEP19Q96LK0 163 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 AGAP4Q96P64 663 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 CCDC32Q9BV29 185 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 SLC25A19Q9HC21 320 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 SMURF1Q9HCE7 757 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 HHATLQ9HCP6 504 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 MYNNQ9NPC7 610 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 ENOPH1Q9UHY7 261 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 TBC1D24Q9ULP9 559 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 ANGPT4Q9Y264 503 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 DSPPQ9NZW4 1301 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 ARRDC5A6NEK1 342 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 QSOX1O00391 747 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 CCNKO75909 580 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 TCEA1P23193 301 aaKnown RBP17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 TAS2R50P59544 299 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 STARD3Q14849 445 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 DUSP7Q16829 419 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 RSBN1Q5VWQ0 802 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 BRAT1Q6PJG6 821 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 FAM46DQ8NEK8 389 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 TCEAL4Q96EI5 215 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 IL4I1Q96RQ9 567 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 ZSCAN5AQ9BUG6 496 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 CNPPD1Q9BV87 410 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 TP63Q9H3D4 680 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 C11orf16Q9NQ32 467 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 PDZK1P1A8MUH7 402 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 WASH3PC4AMC7 463 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 FOXE1O00358 373 aaPredicted RBP17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 ZNF197O14709 1029 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 FFAR1O14842 300 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 ENTPD6O75354 484 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 PIPP12273 146 aaPredicted RBP17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 NPPBP16860 134 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 PTPN2P17706 415 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 LIM2P55344 173 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 GPM6BQ13491 265 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 TSTA3Q13630 321 aaPredicted RBP17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 PUM1Q14671 1186 aaKnown RBP eCLIP17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 LEXMQ3ZCV2 418 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 BCL7AQ4VC05 210 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 TMEM25Q86YD3 366 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 LAS2Q8IYD9 372 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 PSD4Q8NDX1 1056 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 ASPNQ9BXN1 380 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 SPNS1Q9H2V7 528 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 FZD3Q9NPG1 666 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 CRNNQ9UBG3 495 aaPredicted RBP17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 KCND3Q9UK17 655 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 TRAPPC4Q9Y296 219 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 LSM2Q9Y333 95 aaKnown RBP17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 TRAV19A0A0A6YYK7 116 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 A0A1W2PRB8 838 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 PIPSLA2A3N6 862 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 H3BM21 787 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 IFNW1P05000 195 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 RB1P06400 928 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 S100A1P23297 94 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 ERVK-21P61565 698 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 COPZ1P61923 177 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 MEF2AQ02078 507 aaPredicted RBP17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 TMC5Q6UXY8 1006 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 TAGAPQ8N103 731 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 MMP21Q8N119 569 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 WDR34Q96EX3 536 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 FOPNLQ96NB1 174 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 OR2A14Q96R47 310 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 BARHL1Q9BZE3 327 aa17.48■□□□□ 0.39
PCDHA1-202ENST00000394633 TRBV4-1A0A0J9YWV2 114 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 EPOPA6NHQ4 379 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 LEFTY1O75610 366 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 SLITRK5O94991 958 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 C1orf105O95561 183 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 SCG5P05408 212 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 KLK1P06870 262 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 C1GALT1C1LP0DN25 315 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 CKMT1AP12532 417 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 TIMP2P16035 220 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 CD72P21854 359 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 TIE1P35590 1138 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 RPS19P39019 145 aaKnown RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 RPL3P39023 403 aaKnown RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 ALDH9A1P49189 494 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 OR2B6P58173 313 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 DSTNP60981 165 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 RHAGQ02094 409 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 TMEM115Q12893 351 aaPredicted RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 TMEM220Q6QAJ8 160 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 OR8H2Q8N162 312 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 FLCNQ8NFG4 579 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 APOBEC4Q8WW27 367 aaKnown RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 GLYATL1Q969I3 302 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 C3orf14Q9HBI5 128 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms