RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PCDHB16Q9NRJ7 776 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 CLN6Q9NWW5 311 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 RAB23Q9ULC3 237 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 LRFN2Q9ULH4 789 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 A0A1W2PPL8 197 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 MFSD2BA6NFX1 497 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 OR7A17O14581 309 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 ZNF254O75437 659 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 ACSM4P0C7M7 580 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 CORO1AP31146 461 aaKnown RBP18.03■□□□□ 0.48
HOXC6-202ENST00000394331 RPA4Q13156 261 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 VEZF1Q14119 521 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 FCN2Q15485 313 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 ASPGQ86U10 573 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 SMIM14Q96QK8 99 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 FAM129BQ96TA1 746 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 MND1Q9BWT6 205 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 ADAM30Q9UKF2 790 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 OGDHLQ9ULD0 1010 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 H0YC42 278 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 COCHO43405 550 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 ADAM11O75078 769 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 PAHP00439 452 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 KLKB1P03952 638 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 SOX3P41225 446 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 TGM4P49221 684 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 GATMP50440 423 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 FGFBP1Q14512 234 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 USP39Q53GS9 565 aaKnown RBP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 ADGRF1Q5T601 910 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 RNF219Q5W0B1 726 aaPredicted RBP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 TRIM46Q7Z4K8 759 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 FAM9CQ8IZT9 166 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 KRTCAP2Q8N6L1 136 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 SRFBP1Q8NEF9 429 aaKnown RBP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 OR10G2Q8NGC3 310 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 OR6M1Q8NGM8 313 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 RIT1Q92963 219 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 DPYSL5Q9BPU6 564 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 TMEM175Q9BSA9 504 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 TXNL4BQ9NX01 149 aaKnown RBP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 CHD5Q8TDI0 1954 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 CSO75390 466 aaKnown RBP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 PROS1P07225 676 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 GALTP07902 379 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 SELPP16109 830 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 STOMP27105 288 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 ERVK-21P61565 698 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 PPIGQ13427 754 aaKnown RBP eCLIP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 ZMYND11Q15326 602 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 CD276Q5ZPR3 534 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 PRSS55Q6UWB4 352 aaPredicted RBP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 GOLGA7Q7Z5G4 137 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 FBXO22Q8NEZ5 403 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 TMEM163Q8TC26 289 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 SECISBP2Q96T21 854 aaKnown RBP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 DPCDQ9BVM2 203 aaPredicted RBP18.02■□□□□ 0.48
HOXC6-202ENST00000394331 SLC25A19Q9HC21 320 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 BPIFA1Q9NP55 256 aa18.02■□□□□ 0.48
HOXC6-202ENST00000394331 DNAH12Q6ZR08 3092 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 STC2O76061 302 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 MPC2O95563 127 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 LDOC1O95751 146 aaPredicted RBP18.02■□□□□ 0.47
HOXC6-202ENST00000394331 CLEC2LP0C7M8 214 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 APEX1P27695 318 aaKnown RBP18.02■□□□□ 0.47
HOXC6-202ENST00000394331 HOXA1P49639 335 aaPredicted RBP18.02■□□□□ 0.47
HOXC6-202ENST00000394331 NFE2L1Q14494 772 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 HSD17B12Q53GQ0 312 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 DOK6Q6PKX4 331 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 RRM2BQ7LG56 351 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 ADGRD2Q7Z7M1 963 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 LUZP2Q86TE4 346 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 DBF4BQ8NFT6 615 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 OR4C15Q8NGM1 316 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 PHF21AQ96BD5 680 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 LINC00052Q96N35 136 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 MAPKAP1Q9BPZ7 522 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 ELOVL6Q9H5J4 265 aa18.02■□□□□ 0.47
HOXC6-202ENST00000394331 FNDC3AQ9Y2H6 1198 aaKnown RBP18.02■□□□□ 0.47
HOXC6-202ENST00000394331 HOXA2O43364 376 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 SH3BP5O60239 455 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 B3GALNT1O75752 331 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 KCNK5O95279 499 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 MAOBP27338 520 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 SLC6A1P30531 599 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 S100A3P33764 101 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 KCNJ10P78508 379 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 CAMK1Q14012 370 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 NCEH1Q6PIU2 408 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 ZNF730Q6ZMV8 503 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 SLC5A8Q8N695 610 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 OR11H4Q8NGC9 324 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 SLC9A6Q92581 669 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 ESAMQ96AP7 390 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 SARS2Q9NP81 518 aaKnown RBP18.01■□□□□ 0.47
HOXC6-202ENST00000394331 KCMF1Q9P0J7 381 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 LIPT1Q9Y234 373 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 PCDHB1Q9Y5F3 818 aa18.01■□□□□ 0.47
HOXC6-202ENST00000394331 A0A0A6YYJ9 748 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms