RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GPR141Q7Z602 305 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 NRROSQ86YC3 692 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 ACOT4Q8N9L9 421 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 BPIFB6Q8NFQ5 453 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 OR5D16Q8NGK9 328 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 TBC1D20Q96BZ9 403 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 QRFPRQ96P65 431 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 FBRSQ9HAH7 460 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 RSL24D1Q9UHA3 163 aaKnown RBP14.3□□□□□ -0.12
GPC3-202ENST00000394299 ORC6Q9Y5N6 252 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 COLEC10Q9Y6Z7 277 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 SLC16A6O15403 523 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 SH3BP5O60239 455 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 KCNJ13O60928 360 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 RECKO95980 971 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 CELA2BP08218 269 aaPredicted RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 HTR1AP08908 422 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 PRKAG1P54619 331 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 SRP54P61011 504 aaKnown RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 CCINQ13939 588 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 GANABQ14697 944 aaKnown RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 MAPK11Q15759 364 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 SAXO2Q658L1 398 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 ABHD17CQ6PCB6 329 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 OR13H1Q8NG92 308 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 FAM3CQ92520 227 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 NECTIN4Q96NY8 510 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 WFDC6Q9BQY6 131 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 RHNO1Q9BSD3 238 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 YIPF4Q9BSR8 244 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 RAB11FIP5Q9BXF6 653 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 GABARAPL1Q9H0R8 117 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 TTYH1Q9H313 450 aaPredicted RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 KIR3DX1Q9H7L2 352 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 PAK1IP1Q9NWT1 392 aaPredicted RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 CCDC88CQ9P219 2028 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 PRAMEF27A3QJZ7 478 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 DNAJB6O75190 326 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 HTR1BP28222 390 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 FMO3P31513 532 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 CCT3P49368 545 aaKnown RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 CDH12P55289 794 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 PCBP3P57721 371 aaKnown RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 RBBP4Q09028 425 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 CDK5R2Q13319 367 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 SMN1Q16637 294 aaKnown RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 ZNF630Q2M218 657 aaPredicted RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 IFI44LQ53G44 452 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 PRRT3Q5FWE3 981 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 CCDC116Q8IYX3 515 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 TTC29Q8NA56 475 aaPredicted RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 POP5Q969H6 163 aaKnown RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 NEURL3Q96EH8 262 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 PITHD1Q9GZP4 211 aaPredicted RBP14.29□□□□□ -0.12
GPC3-202ENST00000394299 SRMSQ9H3Y6 488 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 CXorf21Q9HAI6 301 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 FANCEQ9HB96 536 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 KRT84Q9NSB2 600 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 KIF17Q9P2E2 1029 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 KLF15Q9UIH9 416 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 ASB4Q9Y574 426 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 PCDHGA4Q9Y5G9 962 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 LYVE1Q9Y5Y7 322 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 AP1M2Q9Y6Q5 423 aa14.29□□□□□ -0.12
GPC3-202ENST00000394299 NINQ8N4C6 2090 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 TNFRSF11BO00300 401 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 HMGN4O00479 90 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 C9P02748 559 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 POLR2CP19387 275 aaPredicted RBP14.28□□□□□ -0.12
GPC3-202ENST00000394299 HIST1H1TP22492 207 aaPredicted RBP14.28□□□□□ -0.12
GPC3-202ENST00000394299 ATP5A1P25705 553 aaKnown RBP14.28□□□□□ -0.12
GPC3-202ENST00000394299 CMPK1P30085 196 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 SERPINB1P30740 379 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 FEN1P39748 380 aaKnown RBP14.28□□□□□ -0.12
GPC3-202ENST00000394299 FRKP42685 505 aaPredicted RBP14.28□□□□□ -0.12
GPC3-202ENST00000394299 EPS8Q12929 822 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 BIRC2Q13490 618 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 PUM1Q14671 1186 aaKnown RBP eCLIP14.28□□□□□ -0.12
GPC3-202ENST00000394299 SLC9A5Q14940 896 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 GPR19Q15760 415 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 ZBED5Q49AG3 693 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 CRB2Q5IJ48 1285 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 GPR107Q5VW38 600 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 ZNF425Q6IV72 752 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 TRIM69Q86WT6 500 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 CCDC71Q8IV32 467 aaPredicted RBP14.28□□□□□ -0.12
GPC3-202ENST00000394299 SLC22A18ASQ8N1D0 253 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 OR10G6Q8NH81 332 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 ASB12Q8WXK4 309 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 TMEM19Q96HH6 336 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 AMDHD1Q96NU7 426 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 FEVQ99581 238 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 C8orf33Q9H7E9 229 aaPredicted RBP14.28□□□□□ -0.12
GPC3-202ENST00000394299 RASSF1Q9NS23 344 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 MMP17Q9ULZ9 603 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 CYP8B1Q9UNU6 501 aa14.28□□□□□ -0.12
GPC3-202ENST00000394299 PCDH17O14917 1159 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 SEMA4FO95754 770 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 OR12D1P0DN82 309 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms