RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 NFE2L1Q14494 772 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 CCDC92Q53HC0 331 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 RSBN1Q5VWQ0 802 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 ZNF770Q6IQ21 691 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 PAQR6Q6TCH4 344 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 OLIG3Q7RTU3 272 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 VN1R5Q7Z5H4 357 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 CCDC190Q86UF4 302 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 GPR32P1Q8NGA4 272 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 ZNF689Q96CS4 500 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 TMEM19Q96HH6 336 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 SGPP1Q9BX95 441 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 HOXD1Q9GZZ0 328 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 HHATLQ9HCP6 504 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 SNTG1Q9NSN8 517 aa13.28□□□□□ -0.28
GAPVD1-205ENST00000394084 PNMA8CA0A1B0GUJ8 204 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 DYRK3O43781 588 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 TPST2O60704 377 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 LILRB3O75022 631 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 SEMA7AO75326 666 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 SRPRAP08240 638 aaKnown RBP13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 IRS1P35568 1242 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 RPL3P39023 403 aaKnown RBP13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 MXD1Q05195 221 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 MADCAM1Q13477 382 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 E2F2Q14209 437 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 ELOAQ14241 798 aaKnown RBP13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 TIMM50Q3ZCQ8 353 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 TRIM60Q495X7 471 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 RAET1GQ6H3X3 334 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 ERAP2Q6P179 960 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 TMIGD1Q6UXZ0 262 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 IQCF1Q8N6M8 205 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 VWCEQ96DN2 955 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 FAM83CQ9BQN1 747 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 SLC30A2Q9BRI3 323 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 UCK2Q9BZX2 261 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 SMURF1Q9HCE7 757 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 CNOT2Q9NZN8 540 aaKnown RBP13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 MKLN1Q9UL63 735 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 SNX11Q9Y5W9 270 aa13.27□□□□□ -0.28
GAPVD1-205ENST00000394084 SH3D21A4FU49 640 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 CCNKO75909 580 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 UQCRC2P22695 453 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 SLC15A1P46059 708 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 MANFP55145 182 aaKnown RBP13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 SPDYE7PQ495Y7 208 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 BCL7AQ4VC05 210 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 ZMAT1Q5H9K5 638 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 CNKSR3Q6P9H4 555 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 TRMT61AQ96FX7 289 aaKnown RBP13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 CTRCQ99895 268 aa13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.27□□□□□ -0.29
GAPVD1-205ENST00000394084 A8MVJ9 347 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 CXCL14O95715 111 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 TNNI3P19429 210 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 COPZ1P61923 177 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 GPR65Q8IYL9 337 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 TCEANCQ8N8B7 351 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 GPR151Q8TDV0 419 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 OTUB1Q96FW1 271 aaPredicted RBP13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 F2RL3Q96RI0 385 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 TDP1Q9NUW8 608 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 ENOPH1Q9UHY7 261 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 AP3D1O14617 1153 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 MPZL2O60487 215 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 CSO75390 466 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 POP7O75817 140 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 FGF18O76093 207 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 DGKGP49619 791 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 NOGQ13253 232 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 BCL2A1Q16548 175 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 PRAMEF14Q5SWL7 426 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 DCST1Q5T197 706 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 PRAMEF13Q5VWM6 474 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 LRRC56Q8IYG6 542 aaPredicted RBP13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 ADGRF3Q8IZF5 1079 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 OR4D11Q8NGI4 311 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 EXOSC8Q96B26 276 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 EFHD2Q96C19 240 aaPredicted RBP13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 WDR34Q96EX3 536 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 NEDD4LQ96PU5 975 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 TAPBPLQ9BX59 468 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 BARHL1Q9BZE3 327 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 REV1Q9UBZ9 1251 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 ASF1AQ9Y294 204 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 A0A0G2JN53 185 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 SOD1P00441 154 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 OSMP13725 252 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 TCEA1P23193 301 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 ELAVL4P26378 380 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 GPR1P46091 355 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 NTHL1P78549 312 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 TCTN3Q6NUS6 607 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 C19orf48Q6RUI8 117 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 CASP12Q6UXS9 341 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 NRARPQ7Z6K4 114 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 SLC9B2Q86UD5 537 aa13.26□□□□□ -0.29
GAPVD1-205ENST00000394084 IL17RDQ8NFM7 739 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms