RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TSPAN3O60637 253 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 SDC3O75056 442 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 GLP2RO95838 553 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 FEN1P39748 380 aaKnown RBP14.38□□□□□ -0.11
VLDLR-202ENST00000382099 SNRPEP62304 92 aaKnown RBP14.38□□□□□ -0.11
VLDLR-202ENST00000382099 SPIBQ01892 262 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 DSC2Q02487 901 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 CHRNA6Q15825 494 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 ZNF628Q5EBL2 1059 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 OXR1Q8N573 874 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 OR9Q2Q8NGE9 314 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 TSNAXQ99598 290 aaKnown RBP14.38□□□□□ -0.11
VLDLR-202ENST00000382099 OSGEPL1Q9H4B0 414 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 ASH2LQ9UBL3 628 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 A0A1B0GVI7 797 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 LANCL1O43813 399 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 LRATO95237 230 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 GIFP27352 417 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 MATKP42679 507 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 RBBP4Q09028 425 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 SLC6A19Q695T7 634 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 SLC25A25Q6KCM7 469 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 STK40Q8N2I9 435 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 CLDN22Q8N7P3 220 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.11
VLDLR-202ENST00000382099 TADA1Q96BN2 335 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 ATOH8Q96SQ7 321 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 SARS2Q9NP81 518 aaKnown RBP14.38□□□□□ -0.11
VLDLR-202ENST00000382099 TMEM184CQ9NVA4 438 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 TAS2R3Q9NYW6 316 aa14.38□□□□□ -0.11
VLDLR-202ENST00000382099 D6RAR5 112 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 FGF2P09038 288 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 HIST1H2AGP0C0S8 130 aaPredicted RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 HIST1H2ADP20671 130 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 BMP8BP34820 402 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ARSDP51689 593 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 NCF4Q15080 339 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 HIST2H2AA3Q6FI13 130 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 C19orf48Q6RUI8 117 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 BMP8AQ7Z5Y6 402 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 LGI4Q8N135 537 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 GANCQ8TET4 914 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 RNF34Q969K3 372 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 HIST1H2AHQ96KK5 128 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 HIST1H2AJQ99878 128 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 APOL5Q9BWW9 433 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 MYOZ2Q9NPC6 264 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ZDHHC4Q9NPG8 344 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 NDUFAF4Q9P032 175 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 GPN3Q9UHW5 284 aaPredicted RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 MKL2Q9ULH7 1088 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 CLEC4AQ9UMR7 237 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 NINQ8N4C6 2090 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 GSAPA4D1B5 854 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 GRXCR2A6NFK2 248 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ENTPD6O75354 484 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 VTNP04004 478 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 SLC6A1P30531 599 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ITGA1P56199 1179 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 CLDN8P56748 225 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ERVPABLB-1P60509 514 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 SLC25A52Q3SY17 297 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ATG9BQ674R7 924 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ZCCHC12Q6PEW1 402 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 PAQR3Q6TCH7 311 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 HTR3DQ70Z44 454 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 BCDIN3DQ7Z5W3 292 aaKnown RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 VSIG10LQ86VR7 867 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 TM9SF4Q92544 642 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 NR4A3Q92570 626 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 MRPS24Q96EL2 167 aaKnown RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 C11orf24Q96F05 449 aaPredicted RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 PAWRQ96IZ0 340 aaKnown RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 PTDSS2Q9BVG9 487 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 CINPQ9BW66 212 aaPredicted RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ZNF302Q9NR11 478 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 TREX1Q9NSU2 369 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 PIGVQ9NUD9 493 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 GSTK1Q9Y2Q3 226 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ASB1Q9Y576 335 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 KCTD3Q9Y597 815 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 TUBAL3A6NHL2 446 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ONECUT3O60422 494 aaPredicted RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 SELENOFO60613 162 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 MSCO60682 206 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 C1QCP02747 245 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 CD63P08962 238 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ENGP17813 658 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 S100A3P33764 101 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 SELENOPP49908 381 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ADIGQ0VDE8 80 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 PPIGQ13427 754 aaKnown RBP eCLIP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 TRAM2Q15035 370 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 PRAMEF13Q5VWM6 474 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ALKBH2Q6NS38 261 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ZNF730Q6ZMV8 503 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 RFT1Q96AA3 541 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 GAS2L1Q99501 681 aaPredicted RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 ADAT1Q9BUB4 502 aaKnown RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 GABARAPL3Q9BY60 117 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms