RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 HDAC2Q92769 488 aaKnown RBP18.25■□□□□ 0.51
GMDS-201ENST00000380805 ZNF347Q96SE7 839 aa18.25■□□□□ 0.51
GMDS-201ENST00000380805 BARD1Q99728 777 aaKnown RBP18.25■□□□□ 0.51
GMDS-201ENST00000380805 SRMSQ9H3Y6 488 aa18.25■□□□□ 0.51
GMDS-201ENST00000380805 NDUFAF4Q9P032 175 aa18.25■□□□□ 0.51
GMDS-201ENST00000380805 ANKMY1Q9P2S6 941 aa18.25■□□□□ 0.51
GMDS-201ENST00000380805 SAMHD1Q9Y3Z3 626 aaKnown RBP18.25■□□□□ 0.51
GMDS-201ENST00000380805 ZNF451Q9Y4E5 1061 aa18.25■□□□□ 0.51
GMDS-201ENST00000380805 KLK4Q9Y5K2 254 aa18.25■□□□□ 0.51
GMDS-201ENST00000380805 ORC6Q9Y5N6 252 aa18.25■□□□□ 0.51
GMDS-201ENST00000380805 LOC100130705A0A1B0GUX0 176 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 OR2A25A4D2G3 310 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 ERI3O43414 337 aaKnown RBP18.24■□□□□ 0.51
GMDS-201ENST00000380805 AHCYL1O43865 530 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 B4GALT2O60909 372 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 JRKO75564 520 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 C9P02748 559 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 SERPIND1P05546 499 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 RYKP34925 604 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 DAPP51397 102 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 STXBP1P61764 594 aaKnown RBP18.24■□□□□ 0.51
GMDS-201ENST00000380805 TOR1AIP1Q5JTV8 583 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 TMEM64Q6YI46 380 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 RD3Q7Z3Z2 195 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 VN1R4Q7Z5H5 301 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 SLC22A18ASQ8N1D0 253 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 ZNF687Q8N1G0 1237 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 ACOT4Q8N9L9 421 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 NT5CQ8TCD5 201 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 EXOSC8Q96B26 276 aaKnown RBP18.24■□□□□ 0.51
GMDS-201ENST00000380805 TMEM121BQ9BXQ6 578 aaPredicted RBP18.24■□□□□ 0.51
GMDS-201ENST00000380805 C6orf106Q9H6K1 298 aaPredicted RBP18.24■□□□□ 0.51
GMDS-201ENST00000380805 SLC35C2Q9NQQ7 365 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 THUMPD1Q9NXG2 353 aaKnown RBP18.24■□□□□ 0.51
GMDS-201ENST00000380805 PCDHGB3Q9Y5G1 929 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 PCDHGA8Q9Y5G5 932 aa18.24■□□□□ 0.51
GMDS-201ENST00000380805 FAM221BA6H8Z2 402 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 M0QX08 132 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 DIRAS1O95057 198 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 GSTT1P30711 240 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 CDK9P50750 372 aaKnown RBP18.23■□□□□ 0.51
GMDS-201ENST00000380805 CASP9P55211 416 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 RELAQ04206 551 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 ILF3Q12906 894 aaKnown RBP eCLIP18.23■□□□□ 0.513e-7■■■■■ 27.5
GMDS-201ENST00000380805 KEAP1Q14145 624 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 CEBPEQ15744 281 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 REEP3Q6NUK4 255 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 CEACAM20Q6UY09 585 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 SYT13Q7L8C5 426 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 ARMC8Q8IUR7 673 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 HORMAD2Q8N7B1 307 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 OR13H1Q8NG92 308 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 AMDHD1Q96NU7 426 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 POT1Q9NUX5 634 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 C5AR2Q9P296 337 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 APOBEC3BQ9UH17 382 aaKnown RBP18.23■□□□□ 0.51
GMDS-201ENST00000380805 SNX8Q9Y5X2 465 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 CEPT1Q9Y6K0 416 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 ARHGEF17Q96PE2 2063 aaPredicted RBP18.23■□□□□ 0.51
GMDS-201ENST00000380805 MYO1GB0I1T2 1018 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 ADAMDEC1O15204 470 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 CHRNB1P11230 501 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 ISL1P61371 349 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 SLAMF1Q13291 335 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 FAM180BQ6P0A1 224 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 Q6ZS52 159 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 C6orf120Q7Z4R8 191 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 OR8K5Q8NH50 307 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 GEMIN6Q8WXD5 167 aaKnown RBP18.23■□□□□ 0.51
GMDS-201ENST00000380805 JPH3Q8WXH2 748 aaPredicted RBP18.23■□□□□ 0.51
GMDS-201ENST00000380805 GAL3ST3Q96A11 431 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 TM4SF19Q96DZ7 209 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 OR2A14Q96R47 310 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 ZNF300Q96RE9 604 aaPredicted RBP18.23■□□□□ 0.51
GMDS-201ENST00000380805 GLIPR2Q9H4G4 154 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 CES1P1Q9UKY3 287 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 HSPE1-MOB4S4R3N1 261 aa18.23■□□□□ 0.51
GMDS-201ENST00000380805 A0A0G2JN53 185 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 A0A1W2PR48 441 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 PRAMEF25A6NGN4 478 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 A8MVJ9 347 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 UGT2B11O75310 529 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 TNFP01375 233 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 TFPTP0C1Z6 253 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 ITGA2P17301 1181 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 CDH2P19022 906 aaPredicted RBP18.22■□□□□ 0.51
GMDS-201ENST00000380805 CD72P21854 359 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 SH3BGRP55822 239 aaPredicted RBP18.22■□□□□ 0.51
GMDS-201ENST00000380805 GABARAPL2P60520 117 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 TGM3Q08188 693 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 HSPB3Q12988 150 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 TDGQ13569 410 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 PRRT3Q5FWE3 981 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 CHDHQ8NE62 594 aaPredicted RBP18.22■□□□□ 0.51
GMDS-201ENST00000380805 SFXN5Q8TD22 340 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 APOBEC4Q8WW27 367 aaKnown RBP18.22■□□□□ 0.51
GMDS-201ENST00000380805 UCN3Q969E3 161 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 ING2Q9H160 280 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 CHRDQ9H2X0 955 aa18.22■□□□□ 0.51
GMDS-201ENST00000380805 LYARQ9NX58 379 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms