RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 MAPKAP1Q9BPZ7 522 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 ROGDIQ9GZN7 287 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 RHOJQ9H4E5 214 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 EHD1Q9H4M9 534 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 CAB39LQ9H9S4 337 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 POPDC3Q9HBV1 291 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 PRDM7Q9NQW5 492 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 CD274Q9NZQ7 290 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 Q9UFV3 132 aa21.37■■□□□ 1.01
U2AF1-202ENST00000380276 ZNF490Q9ULM2 529 aaPredicted RBP21.37■■□□□ 1.01
U2AF1-202ENST00000380276 RTCAO00442 366 aaKnown RBP21.36■■□□□ 1.01
U2AF1-202ENST00000380276 AQP7O14520 342 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 STK16O75716 305 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 PIAS1O75925 651 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 S100BP04271 92 aaPredicted RBP21.36■■□□□ 1.01
U2AF1-202ENST00000380276 PCNAP12004 261 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 COX7A2P14406 83 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 PIGAP37287 484 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 MSH2P43246 934 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 IST1P53990 364 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 DR1Q01658 176 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 ASPHQ12797 758 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 SNTB1Q13884 538 aaKnown RBP21.36■■□□□ 1.01
U2AF1-202ENST00000380276 FASTKD3Q14CZ7 662 aaKnown RBP21.36■■□□□ 1.01
U2AF1-202ENST00000380276 PAGE2BQ5JRK9 111 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 SYDE1Q6ZW31 735 aaPredicted RBP21.36■■□□□ 1.01
U2AF1-202ENST00000380276 ZZZ3Q8IYH5 903 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 OR8K3Q8NH51 312 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 DGAT2Q96PD7 388 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 KRT12Q99456 494 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 EFCAB11Q9BUY7 163 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 DERL2Q9GZP9 239 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 LYRM4Q9HD34 91 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 NSMCE4AQ9NXX6 385 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 ATG4BQ9Y4P1 393 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 EML6Q6ZMW3 1958 aa21.36■■□□□ 1.01
U2AF1-202ENST00000380276 TRGV5A0A0B4J1U4 118 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 ZNF354AO60765 605 aaPredicted RBP21.35■■□□□ 1.01
U2AF1-202ENST00000380276 WDR1O75083 606 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 CCDC166P0CW27 439 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 CD99P14209 185 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 CPN2P22792 545 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 IRF8Q02556 426 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 LAPTM5Q13571 262 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 FRG1Q14331 258 aaKnown RBP21.35■■□□□ 1.01
U2AF1-202ENST00000380276 RTL6Q6ICC9 239 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 SULT1C3Q6IMI6 304 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 ZNF793Q6ZN11 406 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 LIX1LQ8IVB5 337 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 SRFBP1Q8NEF9 429 aaKnown RBP21.35■■□□□ 1.01
U2AF1-202ENST00000380276 CNPPD1Q9BV87 410 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 POLDIP3Q9BY77 421 aaKnown RBP21.35■■□□□ 1.01
U2AF1-202ENST00000380276 SEMA4BQ9NPR2 832 aaPredicted RBP21.35■■□□□ 1.01
U2AF1-202ENST00000380276 TXNDC16Q9P2K2 825 aa21.35■■□□□ 1.01
U2AF1-202ENST00000380276 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.35■■□□□ 1.01
U2AF1-202ENST00000380276 A0A1B0GVC2 190 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 SAP18O00422 153 aaKnown RBP21.34■■□□□ 1.01
U2AF1-202ENST00000380276 PHGDHO43175 533 aaKnown RBP21.34■■□□□ 1.01
U2AF1-202ENST00000380276 DYRK3O43781 588 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 PRAMEF4O60810 478 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 ETHE1O95571 254 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 CD22P20273 847 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 ADH7P40394 386 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 SSR2P43308 183 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 KCNJ2P63252 427 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 FOLH1Q04609 750 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 CHIT1Q13231 466 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 AP5B1Q2VPB7 878 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 PRAMEF20Q5VT98 475 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 PRAMEF9Q5VWM5 478 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 ARSKQ6UWY0 536 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 OR4N5Q8IXE1 308 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 ACOT4Q8N9L9 421 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 SLC22A8Q8TCC7 542 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 ZNF721Q8TF20 911 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 TSPAN17Q96FV3 270 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 JSRP1Q96MG2 331 aaPredicted RBP21.34■■□□□ 1.01
U2AF1-202ENST00000380276 TBCDQ9BTW9 1192 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 PHACTR1Q9C0D0 580 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 CCM2LQ9NUG4 571 aaPredicted RBP21.34■■□□□ 1.01
U2AF1-202ENST00000380276 MTO1Q9Y2Z2 717 aaKnown RBP21.34■■□□□ 1.01
U2AF1-202ENST00000380276 L3MBTL1Q9Y468 752 aa21.34■■□□□ 1.01
U2AF1-202ENST00000380276 SUSD5O60279 629 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 TGFB1P01137 390 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 TCP1P17987 556 aaKnown RBP21.33■■□□□ 1.01
U2AF1-202ENST00000380276 ATP5A1P25705 553 aaKnown RBP21.33■■□□□ 1.01
U2AF1-202ENST00000380276 DLX5P56178 289 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 POU4F1Q01851 419 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 FOXO1Q12778 655 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 SLC25A35Q3KQZ1 300 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 ZBED8Q8IZ13 594 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 DOK4Q8TEW6 326 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 MS4A8Q9BY19 250 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 MOCS1Q9NZB8 636 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 RNF112Q9ULX5 631 aa21.33■■□□□ 1.01
U2AF1-202ENST00000380276 DNAJC13O75165 2243 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 FAM47E-STBD1D6RA91 191 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 HCN1O60741 890 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 SEC31AO94979 1220 aaKnown RBP21.32■■□□□ 1
U2AF1-202ENST00000380276 UQCRC1P31930 480 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms