RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CYP4Z1Q86W10 505 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 SPPL2AQ8TCT8 520 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 MAL2Q969L2 176 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 TMIGD2Q96BF3 282 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 PDXPQ96GD0 296 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 WDR92Q96MX6 357 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 ADNPQ9H2P0 1102 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 CXorf36Q9H7Y0 433 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 POLR1BQ9H9Y6 1135 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 TIMMDC1Q9NPL8 285 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 LHX9Q9NQ69 397 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 KRT84Q9NSB2 600 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 OR6C2Q9NZP2 312 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 PCOLCE2Q9UKZ9 415 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 SNX7Q9UNH6 387 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 MAP4K5Q9Y4K4 846 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 PCDHGA2Q9Y5H1 932 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 R4GN57 208 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 CHD8Q9HCK8 2581 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 IGKV1-8A0A0C4DH67 115 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 LRIT2A6NDA9 550 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 TMEM247A6NEH6 219 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 LRRC72A6NJI9 287 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 TMEM229AB2RXF0 380 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 C5orf58C9J3I9 102 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 M0QX08 132 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 RTCAO00442 366 aaKnown RBP9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 LCMT2O60294 686 aaKnown RBP9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 ANXA8P13928 327 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 HNRNPA2B1P22626 353 aaKnown RBP9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 RRM2P31350 389 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 SLC5A2P31639 672 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 ALDH9A1P49189 494 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 ANXA11P50995 505 aaKnown RBP9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 YPEL5P62699 121 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 PPP2CBP62714 309 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 PPP2CAP67775 309 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 TGM3Q08188 693 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 PPP1R8Q12972 351 aaKnown RBP9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 RAB39AQ14964 217 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 FBXO43Q4G163 708 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 UBE3DQ7Z6J8 389 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 CLVS1Q8IUQ0 354 aaPredicted RBP9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 TTC29Q8NA56 475 aaPredicted RBP9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 ATG16L2Q8NAA4 619 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 MFSD9Q8NBP5 474 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 OR2L3Q8NG85 312 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 OR5AK3PQ8NH89 298 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 GIPC3Q8TF64 312 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 RASSF5Q8WWW0 418 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 SLC22A18Q96BI1 424 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 TAMM41Q96BW9 452 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 ISOC1Q96CN7 298 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 MSANTD3Q96H12 275 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 ZNF300Q96RE9 604 aaPredicted RBP9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 PITX2Q99697 317 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 DOK1Q99704 481 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 PSD2Q9BQI7 771 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 GABARAPL3Q9BY60 117 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 RIBC2Q9H4K1 309 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 XKR8Q9H6D3 395 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 CXorf21Q9HAI6 301 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 FGF22Q9HCT0 170 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 ENOPH1Q9UHY7 261 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 ACSL6Q9UKU0 697 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 NAALAD2Q9Y3Q0 740 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 GMPPBQ9Y5P6 360 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 SNX5Q9Y5X3 404 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 PIAS3Q9Y6X2 628 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 DOCK9Q9BZ29 2069 aa9.95□□□□□ -0.82
POLR2J3-201ENST00000379340 HEATR5BQ9P2D3 2071 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 TNFRSF11BO00300 401 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 SLC1A7O00341 560 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 SLC31A1O15431 190 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 TMPRSS11DO60235 418 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 GLULP15104 373 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 IL7RP16871 459 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 JUNDP17535 347 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 AQP1P29972 269 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 NTSP30990 170 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 MAT2AP31153 395 aaKnown RBP9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 BCL6P41182 706 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 PXNP49023 591 aaPredicted RBP9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 STXBP1P61764 594 aaKnown RBP9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 CSNK2BP67870 215 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 IL5RAQ01344 420 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 KCNC4Q03721 635 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 PMS2P3Q13401 168 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 SLC9A5Q14940 896 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 MEP1AQ16819 746 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 CTU2Q2VPK5 515 aaKnown RBP9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 SPDYE7PQ495Y7 208 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 KIAA1614Q5VZ46 1190 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 CEACAM20Q6UY09 585 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 TMEM64Q6YI46 380 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 TSPYL5Q86VY4 417 aaPredicted RBP9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 DTWD2Q8NBA8 298 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 OR2L5Q8NG80 312 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 OR13F1Q8NGS4 319 aa9.94□□□□□ -0.82
POLR2J3-201ENST00000379340 SFXN5Q8TD22 340 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms