RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 EIF2S1P05198 315 aaKnown RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 TDGF1P13385 188 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 CAPZBP47756 277 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 EEF1A2Q05639 463 aaKnown RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 DUSP2Q05923 314 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 VAC14Q08AM6 782 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 SIM2Q14190 667 aaPredicted RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 ZNF750Q32MQ0 723 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 GCNT6Q5T4J0 391 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 SLC48A1Q6P1K1 146 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 SPRED1Q7Z699 444 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 SDR16C5Q8N3Y7 309 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 NEURL3Q96EH8 262 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 CNRIP1Q96F85 164 aaPredicted RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 IL21RQ9HBE5 538 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 KCMF1Q9P0J7 381 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 SAMD4AQ9UPU9 718 aaKnown RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 ZNF682O95780 498 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 SUZ12Q15022 739 aaKnown RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 IRGCQ6NXR0 463 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 SUN3Q8TAQ9 357 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 POP5Q969H6 163 aaKnown RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 VPS50Q96JG6 964 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 SERINC2Q96SA4 455 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 SLC38A3Q99624 504 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 TMEM38AQ9H6F2 299 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 YY1AP1Q9H869 796 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 TMEM74BQ9NUR3 256 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 ZNF639Q9UID6 485 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 RAB26Q9ULW5 256 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 AP4B1Q9Y6B7 739 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 PCDH15Q96QU1 1955 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 URADA6NGE7 173 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 MYO1GB0I1T2 1018 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 DENRO43583 198 aaKnown RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 DEAF1O75398 565 aaPredicted RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 ERAL1O75616 437 aaKnown RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 C9P02748 559 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 PROS1P07225 676 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 CDH3P22223 829 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 AQP1P29972 269 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 RPS26P62854 115 aaKnown RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 SRSF5Q13243 272 aaKnown RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 RUNX2Q13950 521 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 C14orf28Q4W4Y0 310 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 TMTC4Q5T4D3 741 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 C6orf52Q5T4I8 152 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 TMEM214Q6NUQ4 689 aaKnown RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 CBLL1Q75N03 491 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 PRSS41Q7RTY9 318 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 BDH2Q9BUT1 245 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 C9orf16Q9BUW7 83 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 ROGDIQ9GZN7 287 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 RAD21L1Q9H4I0 556 aa16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 PRMT8Q9NR22 394 aaPredicted RBP16.41■□□□□ 0.22
THUMPD2-201ENST00000378727 SLC9B1P1A6NJY1 282 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 EIF4E1BA6NMX2 242 aaKnown RBP16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 TMEM229AB2RXF0 380 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 DLGAP1O14490 977 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 TXNDC9O14530 226 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 ZSCAN9O15535 394 aaPredicted RBP16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 SEMG1P04279 462 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 CTSBP07858 339 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 PTGER1P34995 402 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 HSPA13P48723 471 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 NCBP2P52298 156 aaKnown RBP eCLIP16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 VSX2P58304 361 aaPredicted RBP16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 MED21Q13503 144 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 TEAD4Q15561 434 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 KLHL35Q6PF15 583 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 ABHD13Q7L211 337 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 EIF3MQ7L2H7 374 aaKnown RBP16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 VTCN1Q7Z7D3 282 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 CSNK1A1LQ8N752 337 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 PACRGLQ8N7B6 248 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 C19orf47Q8N9M1 422 aaKnown RBP16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 BBS4Q96RK4 519 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 STARD5Q9NSY2 213 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 RPS6KA6Q9UK32 745 aa16.4■□□□□ 0.22
THUMPD2-201ENST00000378727 TNRC6BQ9UPQ9 1833 aaKnown RBP16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 RASAL1O95294 804 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 C8orf89P0DMQ9 161 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 NR2F6P10588 404 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 ALOX12P18054 663 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 NTSP30990 170 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 MAGEA2P43356 314 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 CCT3P49368 545 aaKnown RBP16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 PRIM2P49643 509 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 LIM2P55344 173 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 BNC1Q01954 994 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 SIGLEC14Q08ET2 396 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 RBBP4Q09028 425 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 BNIP3Q12983 259 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 SCARB2Q14108 478 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 DEFB110Q30KQ9 67 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 C6orf120Q7Z4R8 191 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 SHISA5Q8N114 240 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 SLC25A45Q8N413 288 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 HORMAD2Q8N7B1 307 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms