RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PCDH7O60245 1069 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 SEC22BO75396 215 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 AIFM1O95831 613 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 GSTM5P46439 218 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 SOX8P57073 446 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 SLC13A2Q13183 592 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 HSP90B2PQ58FF3 399 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 NDUFAF5Q5TEU4 345 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 UCN3Q969E3 161 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 FCRL1Q96LA6 429 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 IMMP1LQ96LU5 166 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 C3orf30Q96M34 536 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 ATP13A2Q9NQ11 1180 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 PFDN4Q9NQP4 134 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 TEX10Q9NXF1 929 aaPredicted RBP17.58■□□□□ 0.4
SSU72-203ENST00000378725 PCDHA9Q9Y5H5 950 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 ZZEF1O43149 2961 aa17.58■□□□□ 0.4
SSU72-203ENST00000378725 PGRMC2O15173 223 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 PRKRAO75569 313 aaKnown RBP17.57■□□□□ 0.4
SSU72-203ENST00000378725 ANXA4P09525 319 aaPredicted RBP17.57■□□□□ 0.4
SSU72-203ENST00000378725 NR2F6P10588 404 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 OR4D2P58180 307 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 IGLV3-21P80748 117 aaPredicted RBP17.57■□□□□ 0.4
SSU72-203ENST00000378725 EEF1A2Q05639 463 aaKnown RBP17.57■□□□□ 0.4
SSU72-203ENST00000378725 AIMP2Q13155 320 aaKnown RBP17.57■□□□□ 0.4
SSU72-203ENST00000378725 BIKQ13323 160 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 SERTAD2Q14140 314 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 NR6A1Q15406 480 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 RFTN2Q52LD8 501 aaPredicted RBP17.57■□□□□ 0.4
SSU72-203ENST00000378725 SFT2D3Q587I9 215 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 CPZQ66K79 652 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 NOXRED1Q6NXP6 359 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.57■□□□□ 0.4
SSU72-203ENST00000378725 DNAJB14Q8TBM8 379 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 C16orf78Q8WTQ4 265 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 CKAP2Q8WWK9 683 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 PPP3R2Q96LZ3 170 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 TUBB6Q9BUF5 446 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 TRIM55Q9BYV6 548 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 WDR41Q9HAD4 459 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 LHX6Q9UPM6 363 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 WBP11Q9Y2W2 641 aaKnown RBP17.57■□□□□ 0.4
SSU72-203ENST00000378725 TMED5Q9Y3A6 229 aa17.57■□□□□ 0.4
SSU72-203ENST00000378725 NUP210LQ5VU65 1888 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 PKD1L2Q7Z442 2459 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 NSG1A0A0A6YYJ2 146 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 IGHV3-20A0A0C4DH32 117 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 C1orf226A1L170 272 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 WASHC1A8K0Z3 465 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 ERVH48-1M5A8F1 160 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 MASP2O00187 686 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 FGF17O60258 216 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 LDB3O75112 727 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 SKAP2O75563 359 aaPredicted RBP17.56■□□□□ 0.4
SSU72-203ENST00000378725 CEACAM4O75871 244 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 MYO1DO94832 1006 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 JUNP05412 331 aaKnown RBP17.56■□□□□ 0.4
SSU72-203ENST00000378725 PPP2R1BP30154 601 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 ACTN3Q08043 901 aaPredicted RBP17.56■□□□□ 0.4
SSU72-203ENST00000378725 Q0VFX4 171 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 CLNKQ7Z7G1 428 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 CLEC1AQ8NC01 280 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 C19orf60Q96EN9 201 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 WBP1Q96G27 269 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 ALOXE3Q9BYJ1 711 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 ZNF160Q9HCG1 818 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 RIC8BQ9NVN3 520 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 VTI1BQ9UEU0 232 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 CES1P1Q9UKY3 287 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 CFAP47Q6ZTR5 3102 aa17.56■□□□□ 0.4
SSU72-203ENST00000378725 GNG14A0A1W2PPG7 69 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 GLOD5A6NK44 160 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 GPR75O95800 540 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 ICAM2P13598 275 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 DRD2P14416 443 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 CCL11P51671 97 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 POLE2P56282 527 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 TAS2R50P59544 299 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 FOLH1Q04609 750 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 STX4Q12846 297 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 CHAF1BQ13112 559 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 PDCD2Q16342 344 aaPredicted RBP17.55■□□□□ 0.4
SSU72-203ENST00000378725 OR52E8Q6IFG1 317 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 PAPD4Q6PIY7 484 aaKnown RBP17.55■□□□□ 0.4
SSU72-203ENST00000378725 OR4N5Q8IXE1 308 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 LRRC8CQ8TDW0 803 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 DYDC1Q8WWB3 177 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 MAGEB18Q96M61 343 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 C7orf26Q96N11 449 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 LPAR4Q99677 370 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 FAIM2Q9BWQ8 316 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 EBPLQ9BY08 206 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 DLGAP4Q9Y2H0 992 aa17.55■□□□□ 0.4
SSU72-203ENST00000378725 POLR3HQ9Y535 204 aaPredicted RBP17.55■□□□□ 0.4
SSU72-203ENST00000378725 ATP6AP2A0A1C7CYW4 349 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 SLCO1B7G3V0H7 640 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 PEX11AO75192 247 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 ATP6AP2O75787 350 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 DNAJB5O75953 348 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 SEC24DO94855 1032 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms