RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 SNPHO15079 494 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 SLCO2B1O94956 709 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 AZGP1P25311 298 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 CPOXP36551 454 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 EIF2DP41214 584 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 OLR1P78380 273 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 PRDX1Q06830 199 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 PIGFQ07326 219 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 KCNAB2Q13303 367 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 CLEC12AQ5QGZ9 265 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 ENPP6Q6UWR7 440 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM126BQ8IUX1 230 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 ZBTB8BQ8NAP8 495 aaPredicted RBP13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 OR2T11Q8NH01 316 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 ART5Q96L15 291 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 OR8D2Q9GZM6 311 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 TUBB1Q9H4B7 451 aa13.55□□□□□ -0.24
SHROOM1-203ENST00000378679 ASCC3Q8N3C0 2202 aaKnown RBP13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 LOC100130705A0A1B0GUX0 176 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 TAPBPO15533 448 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 IL12BP29460 328 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 LGALS3BPQ08380 585 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 ERI1Q8IV48 349 aaKnown RBP13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 ELSPBP1Q96BH3 223 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 C1GALT1C1Q96EU7 318 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 EHD1Q9H4M9 534 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 Q9N2J8 555 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 ARID1BQ8NFD5 2236 aaPredicted RBP13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 TNFRSF21O75509 655 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM107Q6UX40 140 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 NAGSQ8N159 534 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 AQP11Q8NBQ7 271 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 NUP43Q8NFH3 380 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 ZDHHC1Q8WTX9 485 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 FGF14Q92915 247 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 DOHHQ9BU89 302 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 OR6C2Q9NZP2 312 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 WBP11Q9Y2W2 641 aaKnown RBP13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 ZNF451Q9Y4E5 1061 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 GABRR3A8MPY1 467 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 ARNTLO00327 626 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 EGFP01133 1207 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 GGT1P19440 569 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 TCEA1P23193 301 aaKnown RBP13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 NUDT6P53370 316 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 NFATC4Q14934 902 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 KBTBD8Q8NFY9 601 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 GTF2H4Q92759 462 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 RNF31Q96EP0 1072 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 ALG14Q96F25 216 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 PTCHD1Q96NR3 888 aa13.54□□□□□ -0.24
SHROOM1-203ENST00000378679 TBX1O43435 398 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 LAMTOR5O43504 91 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 IDH3BO43837 385 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 SBK3P0C264 359 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 C11orf91Q3C1V1 193 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 CENPSQ8N2Z9 138 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 GOLM1Q8NBJ4 401 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 HLA-CQ95604 372 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 C5orf34Q96MH7 638 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 MUS81Q96NY9 551 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM168Q9H0V1 697 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM45AQ9NWC5 275 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 EHD3Q9NZN3 535 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 ASB1Q9Y576 335 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 GPR37L1O60883 481 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 COQ9O75208 318 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 SOX14O95416 240 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 FHP07954 510 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 ACADLP28330 430 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 TDGQ13569 410 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM52BQ4KMG9 183 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 NCCRP1Q6ZVX7 275 aaPredicted RBP13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 ZFYVE21Q9BQ24 234 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 OR51V1Q9H2C8 321 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 KCNK12Q9HB15 430 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 POFUT2Q9Y2G5 429 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 SCN10AQ9Y5Y9 1956 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 CROCCQ5TZA2 2017 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 MPZL2O60487 215 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 CHRM5P08912 532 aaPredicted RBP13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 NKX2-5P52952 324 aaPredicted RBP13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 PGM2L1Q6PCE3 622 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 ADAMTSL4Q6UY14 1074 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 SLCO4C1Q6ZQN7 724 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 MSANTD1Q6ZTZ1 278 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 CARM1Q86X55 608 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 FUNDC1Q8IVP5 155 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 OR5K2Q8NHB8 316 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 NETO1Q8TDF5 533 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 CIDECQ96AQ7 238 aaPredicted RBP13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 MBNL1Q9NR56 388 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 HCN4Q9Y3Q4 1203 aa13.53□□□□□ -0.24
SHROOM1-203ENST00000378679 MCIDASD6RGH6 385 aa13.52□□□□□ -0.24
SHROOM1-203ENST00000378679 CDK4P11802 303 aa13.52□□□□□ -0.24
SHROOM1-203ENST00000378679 F3P13726 295 aa13.52□□□□□ -0.24
SHROOM1-203ENST00000378679 MEP1AQ16819 746 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms