RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TMEM246Q9BRR3 403 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ACTR6Q9GZN1 396 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 OR51I1Q9H343 314 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 RANBP3Q9H6Z4 567 aaPredicted RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 WDR6Q9NNW5 1121 aaKnown RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 TDP1Q9NUW8 608 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 B3GNT3Q9Y2A9 372 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 MAU2Q9Y6X3 613 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 SIP14410 1827 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 FOXD2O60548 495 aaPredicted RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 GPR32O75388 356 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ZNF432O94892 652 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 OR3A3P47888 321 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 OR3A2P47893 321 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 SLC9A3P48764 834 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 BLKP51451 505 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 BMXP51813 675 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CDK5R2Q13319 367 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 VEZF1Q14119 521 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 TMEM53Q6P2H8 277 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ENPP6Q6UWR7 440 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ZNF782Q6ZMW2 699 aaPredicted RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 SERINC5Q86VE9 423 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 STX12Q86Y82 276 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CCDC28AQ8IWP9 274 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 PAPD5Q8NDF8 572 aaKnown RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 ZNF548Q8NEK5 533 aaPredicted RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 EPYCQ99645 322 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 FOLH1BQ9HBA9 442 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 UCKL1Q9NWZ5 548 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 EXTL2Q9UBQ6 330 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 MLXQ9UH92 298 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 FBXL21Q9UKT6 434 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ABCG2Q9UNQ0 655 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CEPT1Q9Y6K0 416 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 SOX30O94993 753 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 RPS17P08708 135 aaKnown RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 ANXA3P12429 323 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 IL7P13232 177 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 IFI30P13284 250 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 LCN1P31025 176 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ACTR1BP42025 376 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ACTR1AP61163 376 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CDKL1Q00532 357 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 GSTM4Q03013 218 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 RASGEF1BQ0VAM2 473 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 DOC2AQ14183 400 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 LIPKQ5VXJ0 399 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ANKRD26P1Q6NSI1 321 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 DNM1P34Q6PK57 102 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 KDELC1Q6UW63 502 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 BAIAP2L2Q6UXY1 529 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 RBM23Q86U06 439 aaKnown RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 HDDC3Q8N4P3 179 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 TRAM1L1Q8N609 369 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 TMEM145Q8NBT3 493 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 METTL21AQ8WXB1 218 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 RAB8BQ92930 207 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 GLYATL1Q969I3 302 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 HERC2P3Q9BVR0 1158 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CD93Q9NPY3 652 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 RHCGQ9UBD6 479 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 COPS7AQ9UBW8 275 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ACSL5Q9ULC5 683 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 STUB1Q9UNE7 303 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 PCDHGA2Q9Y5H1 932 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 PRUNE2Q8WUY3 3088 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 OR2AT4A6NND4 320 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 CENPBD1B2RD01 187 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 TMEM150CB9EJG8 249 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 NDUFS4O43181 175 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 COCHO43405 550 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 ZNF821O75541 412 aaPredicted RBP8.04□□□□□ -1.12
VPS36-201ENST00000378060 GSRP00390 522 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 GBAP04062 536 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 RPS3P23396 243 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS36-201ENST00000378060 HRH2P25021 359 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 IL12BP29460 328 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 CPOXP36551 454 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 OR12D2P58182 307 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 ENPP2Q13822 863 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 SLC36A3Q495N2 470 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 PRAMEF17Q5VTA0 474 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 SLC8B1Q6J4K2 584 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 HSDL2Q6YN16 418 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 Q8N402 240 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 GDPD1Q8N9F7 314 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 OR10T2Q8NGX3 314 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 NEK7Q8TDX7 302 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 TMEM40Q8WWA1 233 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 SIPA1Q96FS4 1042 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 ADAD1Q96M93 576 aaKnown RBP8.04□□□□□ -1.12
VPS36-201ENST00000378060 GORASP2Q9H8Y8 452 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 INSL5Q9Y5Q6 135 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 WASH4PA8MWX3 477 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 OR2B3O76000 313 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 OAZ2O95190 189 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 PFKMP08237 780 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 KCNA5P22460 613 aa8.04□□□□□ -1.12
VPS36-201ENST00000378060 CFL1P23528 166 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1322.3 ms